Genome Warehouse

Scientific Name: Citrus x changshan-huyou
Common Names: huyou;
Bioproject: PRJCA022025
Biosample: SAMC3265758
Accession No.: GWHEQVQ00000000.1
GWH reannotation accession: -
GSA raw reads: CRR994629
GVM variations of the species: -
Submitter Organization: colleage of agricultural and biotechnology, Zhejiang University
Contact: Wenbo Chen, chenwenbo@zju.edu.cn
Sequence author(s): Changjiu Miao
Released Date: 2024-05-16
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: hifiasm v0.19.6
Sequencing & coverage: Illumina HiSeq 2000 65.0
Download: DNA GFF RNA Protein
Publication(s): Changjiu Miao, et al. Haplotype-resolved chromosome-level genome assembly of Huyou (Citrus changshanensis). Scientific Data. 2024, 11(1): 605.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHEQVQ00000000	-	Haplotype-resolved genome assembly of Huyou(Citrus changshanensis K. S. Chen et C. X. Fu)	Draft genome in scaffold level	2024-04-19	DNA GFF RNA Protein
GWHEQVQ00000000.1	-	Haplotype-resolved genome assembly of Huyou(Citrus changshanensis K. S. Chen et C. X. Fu)	Draft genome in scaffold level	2024-05-16	DNA GFF RNA Protein

Genome size (bp)	339,900,222
GC content	36.66%
Chromosomes sequence No.	9
Genome sequence No.	31
Maximum genome sequence length (bp)	49,484,945
Minimum genome sequence length (bp)	64,508
Average genome sequence length (bp)	10,964,523
Genome sequence N50 (bp)	30,365,619
Genome sequence N90 (bp)	4,367,322

Annotation of Whole Genome Assembly

Annotation Details