- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJCA034231
- Biosample
- SAMC4489971
- Accession No.
- GWHFILF00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1436793
- GVM variations of the species
- 26,938,825 (SNP), 3,724,480 (Indel)
- Submitter Organization
- Genome Biology Research Center, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
- Contact
- Yongshun Chen, chenys@genetics.ac.cn
- Sequence author(s)
- Yongshun Chen
- Released Date
- 2025-01-15
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 0.19.9
Verkko 1.4 - Sequencing & coverage
- ONT 98.03
PacBio HiFi 42.67 - Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHFILF00000000.1 | - | SL_T2T | Complete genome | 2025-01-15 |
DNA
|
| GWHFILF00000000.2 | - | SLT2T | Complete genome | 2025-05-26 |
DNA
GFF
RNA
CDS
Protein
|
| GWHFILF00000000.3 | - | SLT2T | Draft genome in chromosome level | 2025-08-04 |
DNA
GFF
RNA
CDS
Protein
|
Statistics of Genome Assembly
| Genome size (bp) | 806,915,591 |
| GC content | 34.74% |
| Chromosomes sequence No. | 12 |