Scientific Name
Glycine max
Common Names
soybeans; soybean; Phaseolus max
Bioproject
PRJCA033726
Biosample
SAMC4470457
Accession No.
GWHFOPD00000000.1
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
40,350,378 (SNP), 12,368,700 (Indel)
Submitter Organization
Genetic resources of wheat, Hulunulunbuir Institute of Agriculture and Animal Husbandry
Contact
Rujian Sun, sunrujian321@126.com
Sequence author(s)
Rujian Sun
Released Date
2025-06-26
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
NextDenovo v2.4.0
Sequencing & coverage
Nanopor 100
Download
DNA GFF RNA CDS Protein
Publication(s)
Rujian Sun, et al. Chromosome-level genome assembly of a high-yield Chinese soybean variety Mengdou1137 unlocks genetic potential of disease and lodging resistance. Theoretical and Applied Genetics. 2025, 138(6): 119.0.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHFOPD00000000.1 - Mengdou1137 Draft genome in chromosome level 2025-06-26 DNA GFF RNA CDS Protein

Statistics of Genome Assembly

Genome size (bp) 999,994,219
GC content 35.00%
Chromosomes sequence No. 20
Genome sequence No. 117
Maximum genome sequence length (bp) 61,666,139
Minimum genome sequence length (bp) 26,005
Average genome sequence length (bp) 8,546,959
Genome sequence N50 (bp) 50,255,948
Genome sequence N90 (bp) 43,873,630
Annotation of Whole Genome Assembly
Protein Total
Chromosome 56,017 56,017
Others 232 232
Total 56,249 56,249
Annotation Details
ChrID Protein Total
chr1 2,226 2,226
chr10 2,911 2,911
chr11 3,231 3,231
chr12 2,539 2,539
chr13 3,584 3,584
chr14 2,339 2,339
chr15 2,820 2,820
chr16 1,962 1,962
chr17 2,690 2,690
chr18 3,016 3,016
chr19 2,716 2,716
chr2 3,288 3,288
chr20 2,573 2,573
chr3 2,574 2,574
chr4 2,399 2,399
chr5 2,683 2,683
chr6 3,360 3,360
chr7 2,818 2,818
chr8 3,580 3,580
chr9 2,708 2,708
Others 232 232
Total 56,249 56,249