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  • Lactuca sativa
  • Lsat_Salinas_v7
    • Scientific Name
    Lactuca sativa
    Common Names
    cultivated lettuce; garden lettuce;
    Bioproject
    PRJNA173551
    Biosample
    SAMN01730979
    Accession No.
    GCA_002870075.1
    RefSeq Accession No.
    GCF_002870075.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    UC Davis Genome Center
    Released Date
    2025-05-21
    NCBI Released Date
    2018-01-09
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_002870075.5 GCF_002870075.5 - Lsat_Salinas_v15 Draft genome in contig level 2025-12-23 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_002870075.4 GCF_002870075.4 different Lsat_Salinas_v11 Draft genome in scaffold level 2022-11-23 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_002870075.2 GCF_002870075.2 different Lsat_Salinas_v7 Draft genome in scaffold level 2020-04-13 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_002870075.3 GCF_002870075.3 different Lsat_Salinas_v8 Draft genome in scaffold level 2020-04-13 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_002870075.1 GCF_002870075.1 different Lsat_Salinas_v7 Draft genome in chromosome level 2018-01-09 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,384,036,052
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 11,452
    GC content 38
    Scaffold sequence No. 11,452
    Scaffold L50 386
    Scaffold N50 (bp) 1,769,135
    Scaffold N75 (bp) 824,441
    Scaffold N90 (bp) 362,387
    Contig sequence No. 168,552
    Contig L50 23,487
    Contig N50 (bp) 28,335
    Unique components No. 11,452
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 157,100
    Ns gap sequence region length (bp) 174,423,863
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 38293 0 0 0 0 400 38693

    Statistics of Genome Assembly

    Genome size (bp) 2,384,188,817
    Chromosomes, organellas and plasmids sequnece No. 1
    Genome sequence No. 11,453
    GC content 38
    Scaffold sequence No. 11,453
    Scaffold L50 386
    Scaffold N50 (bp) 1,769,135
    Scaffold N75 (bp) 823,305
    Scaffold N90 (bp) 360,301
    Contig sequence No. 168,553
    Contig L50 23,486
    Contig N50 (bp) 28,336
    Unique components No. 11,453
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 157,100
    Ns gap sequence region length (bp) 174,423,863
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 35603 904 387247 2442 0 46234