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  • Lactuca sativa
  • Lsat_Salinas_v11
    • Scientific Name
    Lactuca sativa
    Common Names
    cultivated lettuce; garden lettuce;
    Bioproject
    PRJNA173551
    Biosample
    SAMN33010172
    Accession No.
    GCA_002870075.4
    RefSeq Accession No.
    GCF_002870075.4
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Lettuce Genome Sequencing Consortium
    Released Date
    2023-11-22
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level Release Date Download Files
    GCA_002870075.4 GCF_002870075.4 different Lsat_Salinas_v11 Draft genome in scaffold level 2022-11-23 DNA GFF RNA Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,589,853,228
    Chromosomes, organellas and plasmids sequnece No. 9
    Genome sequence No. 91
    GC content 38
    Scaffold sequence No. 91
    Scaffold L50 4
    Scaffold N50 (bp) 324,658,466
    Scaffold N75 (bp) 229,423,371
    Scaffold N90 (bp) 209,897,964
    Contig sequence No. 475
    Contig L50 55
    Contig N50 (bp) 12,524,908
    Unique components No. 91
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 384
    Ns gap sequence region length (bp) 1,337,877
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 44232 0 0 0 0 0 44232

    Statistics of Genome Assembly

    Genome size (bp) 2,590,369,317
    Chromosomes, organellas and plasmids sequnece No. 11
    Genome sequence No. 93
    GC content 38
    Scaffold sequence No. 93
    Scaffold L50 4
    Scaffold N50 (bp) 324,658,466
    Scaffold N75 (bp) 229,423,371
    Scaffold N90 (bp) 209,897,964
    Contig sequence No. 477
    Contig L50 55
    Contig N50 (bp) 12,524,908
    Unique components No. 93
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 384
    Ns gap sequence region length (bp) 1,337,877
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 36855 981 31198030 2666 0 51651