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Single Cell Transcriptome
Methylation
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NHP Atlas
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Transcription
PRJNA214874_mmul
Dataset Information
PRJNA214874_mmul
[
Sequencing of milk fat, milk cell, and mammary tissue RNA from rhesus macaques
]
BioProject ID:
PRJNA214874
Original Project ID:
GSE49765
c
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Note:
Gene Expression Profiles
Download Gene Expression Profiles
Reference Genome:
Macaque (Mmul_10)
Genome Annotation:
Macaque (Mmul_10)
Data Processing:
Read filtering: Fastp v0.20.0
Strandness of RNA-seq library: RseQC v2.6.4
Read mapping: STAR v2.7.1a
Sample Display columns
Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Development Stage
GSE ID
Source Name
Race/Breed/Strain
Age
Cell subtype
Mutation
Platform
Unique-Mapping Rate
Coverage Rate
Show
5
10
5
5
10
entries
Search:
Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Deveopment Stage
Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Deveopment Stage
SRX333442
m_2_2_i5
Cells
Healthy Control
USA
_
_
SRX333443
m_2_2_i6
Fat
Healthy Control
USA
_
_
SRX333444
m_2_2_i7
Fat
Healthy Control
USA
_
_
SRX333445
m_2_1_i2
Bx
Healthy Control
USA
_
_
SRX333446
m_2_1_i4
Cells
Healthy Control
USA
_
_
Processing...
Showing 1 to 5 of 101 entries
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Expression Profiles Visualization
Gene Expression
Differentially Expression
Gene Expression Level
Select Genes...
Heatmap
Boxplot
Created with Highcharts 9.1.2
Gene Expression Profiles
0
2
4
6
SRX333483
SRX333481
SRX333487
SRX333485
SRX333520
SRX333489
SRX333524
SRX333526
SRX333494
SRX333496
SRX333490
SRX333492
SRX333498
SRX333528
SRX333542
SRX333540
SRX333469
SRX333461
SRX333463
SRX333465
SRX333467
SRX333478
SRX333472
SRX333470
SRX333476
SRX333474
SRX333449
SRX333447
SRX333445
SRX333443
SRX333510
SRX333512
SRX333514
SRX333516
SRX333518
SRX333451
SRX333453
SRX333455
SRX333457
SRX333459
SRX333503
SRX333501
SRX333507
SRX333505
SRX333509
SRX333537
SRX333535
SRX333533
SRX333531
SRX333539
ENSMMUG00000000001
ENSMMUG00000000005
ENSMMUG00000000007
ENSMMUG00000000010
ENSMMUG00000000015
ENSMMUG00000000017
ENSMMUG00000000019
ENSMMUG00000000022
ENSMMUG00000000024
ENSMMUG00000000029
ENSMMUG00000000032
ENSMMUG00000000037
ENSMMUG00000000039
ENSMMUG00000000042
ENSMMUG00000000044
30
Created with Highcharts 9.1.2
Expression level (TPM)
ENSMMUG00000000001
ENSMMUG00000…
ENSMMUG00000000002
ENSMMUG00000000005
ENSMMUG00000000006
ENSMMUG00000000007
ENSMMUG00000000009
ENSMMUG00000000010
ENSMMUG00000000013
ENSMMUG00000000015
ENSMMUG00000000016
ENSMMUG00000000017
ENSMMUG00000000018
ENSMMUG00000000019
ENSMMUG00000000021
ENSMMUG00000000022
ENSMMUG00000000023
ENSMMUG00000000024
ENSMMUG00000000025
ENSMMUG00000000029
ENSMMUG00000000031
ENSMMUG00000000032
ENSMMUG00000000033
ENSMMUG00000000037
ENSMMUG00000000038
ENSMMUG00000000039
ENSMMUG00000000040
ENSMMUG00000000042
ENSMMUG00000000043
ENSMMUG00000000044
ENSMMUG00000000048
0
25
50
75
100
125
Differentially Analysis Group
condition1
Bx
Bx
Cells
FatS10
FatsS10
Fat
VS
condition2
Cells
Cells
Fat
FatS10
FatsS10
Skim10m
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DEGs Heatmap
DEGs Table
