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NHP Atlas
Non-human primate database
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Transcription
PRJNA238829_cja
Dataset Information
PRJNA238829_cja
[
Alternative Capture of Noncoding RNAs or Protein-Coding Genes by Herpesviruses to Alter Host T-Cell Function
]
BioProject ID:
PRJNA238829
Original Project ID:
GSE55185
c
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Note:
Gene Expression Profiles
Download Gene Expression Profiles
Reference Genome:
White_tufted_ear marmoset (mCalJac1.pat.X)
Genome Annotation:
White_tufted_ear marmoset (mCalJac1.pat.X)
Data Processing:
Read filtering: Fastp v0.20.0
Strandness of RNA-seq library: RseQC v2.6.4
Read mapping: STAR v2.7.1a
Sample Display columns
Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Development Stage
GSE ID
Source Name
Race/Breed/Strain
Age
Cell subtype
Mutation
Platform
Unique-Mapping Rate
Coverage Rate
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Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Deveopment Stage
Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Deveopment Stage
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Expression Profiles Visualization
Gene Expression
Differentially Expression
Gene Expression Level
Select Genes...
Heatmap
Boxplot
Differentially Analysis Group
condition1
anti_GFP
anti_GFP
anti_HSUR1
control
miR27
VS
condition2
anti_HSUR1
anti_HSUR1
control
miR27
untreated
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DEGs Heatmap
DEGs Table
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Search:
Ensemble ID
Gene Symbol
logFC
AveExpr
t-statistic
P.Value
adj.P.Val
Regulation
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