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NHP Atlas
Non-human primate database
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Transcription
PRJNA312819_mmul
Dataset Information
PRJNA312819_mmul
[
Next Generation Sequencing Study of Circadian Changes in Transcriptome of Rhesus Macaque Pineal Gland and Retina
]
BioProject ID:
PRJNA312819
Original Project ID:
GSE78165
c
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Gene Expression Profiles
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Reference Genome:
Macaque (Mmul_10)
Genome Annotation:
Macaque (Mmul_10)
Data Processing:
Read filtering: Fastp v0.20.0
Strandness of RNA-seq library: RseQC v2.6.4
Read mapping: STAR v2.7.1a
Sample Display columns
Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Development Stage
GSE ID
Source Name
Race/Breed/Strain
Age
Cell subtype
Mutation
Platform
Unique-Mapping Rate
Coverage Rate
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Sample Name
Tissue
Disease
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Gender
Deveopment Stage
Sample ID
Sample Name
Tissue
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Expression Profiles Visualization
Gene Expression
Differentially Expression
Gene Expression Level
Select Genes...
Heatmap
Boxplot
Differentially Analysis Group
condition1
Control_Day
Control_Day
Control_Night
Pineal_Dawn
Pineal_Day
Pineal_Dusk
Pineal_Night
Retina_Dawn
Retina_Day
Retina_Dusk
VS
condition2
Control_Night
Control_Night
Pineal_Dawn
Pineal_Day
Pineal_Night
Pineal_Dusk
Retina_Dawn
Retina_Day
Retina_Dusk
Retina_Night
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DEGs Heatmap
DEGs Table