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NHP Atlas
Non-human primate database
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Transcription
PRJNA335657_mfa
Dataset Information
PRJNA335657_mfa
[
RNA-Seq of eye tissues from Monkey eye and retina samples
]
BioProject ID:
PRJNA335657
Original Project ID:
GSE84929
c
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Note:
Gene Expression Profiles
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Reference Genome:
Crab_eating macaque (Macaca_fascicularis_5.0)
Genome Annotation:
Crab_eating macaque (Macaca_fascicularis_5.0)
Data Processing:
Read filtering: Fastp v0.20.0
Strandness of RNA-seq library: RseQC v2.6.4
Read mapping: STAR v2.7.1a
Sample Display columns
Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Development Stage
GSE ID
Source Name
Race/Breed/Strain
Age
Cell subtype
Mutation
Platform
Unique-Mapping Rate
Coverage Rate
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Sample Name
Tissue
Disease
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Gender
Deveopment Stage
Sample ID
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Expression Profiles Visualization
Gene Expression
Differentially Expression
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Boxplot
Differentially Analysis Group
condition1
CentralRetina
CentralRetina
Eye
PeripheralRetina
VS
condition2
Eye
Eye
PeripheralRetina
WholeRetina
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DEGs Heatmap
DEGs Table
