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NHP Atlas
Non-human primate database
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Transcription
PRJNA481380_pan
Dataset Information
PRJNA481380_pan
[
A generally conserved response to hypoxia in iPSC-derived cardiomyocytes from humans and chimpanzees
]
BioProject ID:
PRJNA481380
Original Project ID:
GSE117192
c
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Note:
Gene Expression Profiles
Download Gene Expression Profiles
Reference Genome:
Chimpanzee (Pan_tro_3.0)
Genome Annotation:
Chimpanzee (Pan_tro_3.0)
Data Processing:
Read filtering: Fastp v0.20.0
Strandness of RNA-seq library: RseQC v2.6.4
Read mapping: STAR v2.7.1a
Sample Display columns
Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Development Stage
GSE ID
Source Name
Race/Breed/Strain
Age
Cell subtype
Mutation
Platform
Unique-Mapping Rate
Coverage Rate
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Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Deveopment Stage
Sample ID
Sample Name
Tissue
Disease
Ethnicity/Country
Gender
Deveopment Stage
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Expression Profiles Visualization
Gene Expression
Differentially Expression
Gene Expression Level
Select Genes...
Heatmap
Boxplot
Differentially Analysis Group
condition1
C3647R
C3647R
C3647
C3649
C40210R
C40210
C40280R
C40280
C40300
C4955
VS
condition2
C40210
C40210
C3649
C40210R
C40280
C40280R
C40300
C4955
C8861
C3647R
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DEGs Heatmap
DEGs Table
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entries
Search:
Ensemble ID
Gene Symbol
logFC
AveExpr
t-statistic
P.Value
adj.P.Val
Regulation
ENSPTRG00000000050
PEX10
0.3646
3.738
2.839
0.007521
0.04032
up
ENSPTRG00000000053
TNFRSF14
-3.164
-3.753
-3.788
0.0005803
0.005167
down
ENSPTRG00000000059
PRDM16
1.077
3.285
3.680
0.0007866
0.006662
up
ENSPTRG00000000072
AJAP1
-3.777
-2.948
-5.567
0.000002971
0.00005981
down
ENSPTRG00000000075
CHD5
-0.7144
1.552
-4.062
0.0002645
0.002673
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