Database Resources of the BIG Data Center in 2019.

BIG Data Center Members
Author Information

Abstract

The BIG Data Center at Beijing Institute of Genomics (BIG) of the Chinese Academy of Sciences provides a suite of database resources in support of worldwide research activities in both academia and industry. With the vast amounts of multi-omics data generated at unprecedented scales and rates, the BIG Data Center is continually expanding, updating and enriching its core database resources through big data integration and value-added curation. Resources with significant updates in the past year include BioProject (a biological project library), BioSample (a biological sample library), Genome Sequence Archive (GSA, a data repository for archiving raw sequence reads), Genome Warehouse (GWH, a centralized resource housing genome-scale data), Genome Variation Map (GVM, a public repository of genome variations), Science Wikis (a catalog of biological knowledge wikis for community annotations) and IC4R (Information Commons for Rice). Newly released resources include EWAS Atlas (a knowledgebase of epigenome-wide association studies), iDog (an integrated omics data resource for dog) and RNA editing resources (for editome-disease associations and plant RNA editosome, respectively). To promote biodiversity and health big data sharing around the world, the Open Biodiversity and Health Big Data (BHBD) initiative is introduced. All of these resources are publicly accessible at http://bigd.big.ac.cn.

References

  1. Nucleic Acids Res. 2013 Jan;41(Database issue):D983-6 [PMID: 23175614]
  2. Nat Rev Genet. 2016 Oct 14;17(11):661-678 [PMID: 27739532]
  3. Nucleic Acids Res. 2015 Jan;43(Database issue):D187-92 [PMID: 25399417]
  4. Science. 2017 Oct 6;358(6359):69-75 [PMID: 28983045]
  5. Science. 2018 Oct 19;362(6412):343-347 [PMID: 30166436]
  6. Nucleic Acids Res. 2017 Jan 4;45(D1):D18-D24 [PMID: 27899658]
  7. Genomics Proteomics Bioinformatics. 2017 Feb;15(1):14-18 [PMID: 28387199]
  8. Brief Bioinform. 2019 Jul 19;20(4):1322-1328 [PMID: 29309507]
  9. Nucleic Acids Res. 2018 Jan 4;46(D1):D276-D280 [PMID: 29077939]
  10. Nucleic Acids Res. 2018 Jan 4;46(D1):D447-D453 [PMID: 29106644]
  11. Nucleic Acids Res. 2016 Jan 4;44(D1):D279-85 [PMID: 26673716]
  12. Nucleic Acids Res. 2015 Jan;43(Database issue):D777-83 [PMID: 25404132]
  13. Nucleic Acids Res. 2018 Jan 4;46(D1):D14-D20 [PMID: 29036542]
  14. Nat Genet. 2017 Apr;49(4):643-650 [PMID: 28263316]
  15. Nucleic Acids Res. 2013 Jan;41(Database issue):D892-905 [PMID: 22965133]
  16. Nucleic Acids Res. 2018 Jan 4;46(D1):D121-D126 [PMID: 29036693]
  17. Nucleic Acids Res. 2014 Jan;42(Database issue):D1222-8 [PMID: 24136999]
  18. Autophagy. 2018;14(2):296-310 [PMID: 29157087]
  19. Nature. 2018 May;557(7705):424-428 [PMID: 29743678]
  20. Nat Rev Genet. 2018 May;19(5):299-310 [PMID: 29479082]
  21. OMICS. 2012 Jun;16(6):357-62 [PMID: 22702248]
  22. Nucleic Acids Res. 2019 Jan 8;47(D1):D33-D38 [PMID: 30204897]
  23. Nucleic Acids Res. 2017 Jan 4;45(D1):D1009-D1014 [PMID: 28053167]
  24. Nat Rev Genet. 2016 May 17;17(6):333-51 [PMID: 27184599]
  25. Nature. 2018 Feb 1;554(7690):50-55 [PMID: 29364872]
  26. PLoS One. 2013;8(2):e56961 [PMID: 23451119]
  27. Nucleic Acids Res. 2016 Jan 4;44(D1):D1172-80 [PMID: 26519466]
  28. Genomics Proteomics Bioinformatics. 2018 Feb;16(1):33-49 [PMID: 29474889]
  29. Nucleic Acids Res. 2018 Jan 4;46(D1):D944-D949 [PMID: 29069473]
  30. Nucleic Acids Res. 2017 Jan 4;45(D1):D1040-D1045 [PMID: 27924042]
  31. Nucleic Acids Res. 2018 Jan 4;46(D1):D8-D13 [PMID: 29140470]

MeSH Term

Animals
Big Data
Data Warehousing
Databases, Genetic
Humans
Plants
Web Browser

Links to CNCB-NGDC Resources

Database Commons: DBC001802 (NGDC)

Word Cloud

Similar Articles

Cited By