GWAS

Task Information

Job ID:

Submit Date:

Run Status:

Setting Information:

Reference: Phenotype type:
Minor allele frequency: Genotype missing rate:
Principal components analysis: Number of PCA components:
Association method: Association model:
Significance threshold method: Threshold P-value:
GWAS Results
Chrom SNP ID Position N_mis Allele1 Allele0 Af Beta SE Logl_H1 L_remle P-value
GEMMA: https://github.com/genetics-statistics/GEMMA/
SNP ID Beta SE P-value
EMMAX: http://csg.sph.umich.edu/kang/emmax/download/index.html
Chrom SNP ID Position A1 Test Nmiss Beta Stat P-value
Plink: https://www.cog-genomics.org/plink/1.9/