Difference between revisions of "LncRNAWiki:Featured"
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!HOTTIP | !HOTTIP | ||
| − | ![[]] | + | ![[NONHSAT119717]] |
!HOXA13as, HIT18844, NCRNA00213, ENSG00000243766 | !HOXA13as, HIT18844, NCRNA00213, ENSG00000243766 | ||
!HOXA transcript at the distal tip | !HOXA transcript at the distal tip | ||
Revision as of 09:37, 11 October 2014
| lncRNAdb name | Transcript ID | Alias | Description |
|---|---|---|---|
| 21A | NONHSAT128494 | ncRNA 21A | N/A |
| 7SK | NONHSAT113149 | 7-3 RNA, K-RNA, 7SK-RNA, 7SK snRNA, RN7SK, ENSG00000202198 | RNA, 7SK small nuclear |
| 7SL | lnc-LRR1-1:1 | 7S RNA, SRP RNA, 4.5S SRP RNA, 4.5S RNA, RN7SL1 RNA, ENSG00000258486 | RNA, 7SL, cytoplasmic 1 |
| AK023948 | NONHSAT129210 | N/A | |
| BC200 | lnc-EPCAM-1:2 | BCYRN1,BC200a, NCRNA00004, LINC00004 | BCYRN1, brain cytoplasmic RNA 1 |
| CYP4A22-AS1 | ENST00000444042.2 | Noncoding RNA activating3: ncRNA-a3, ENST00000444042.2, ENSG00000225506 | CYP4A22 antisense RNA 1 |
| cyrano | ENST00000500949.2 | LOC729082, linc-NUSAP1-1, OIP5-AS1 | OIP5 antisense RNA 1 |
| DHFR upstream transcripts | NONHSAT102417 | DHFR minor transcript 5'-UTR, ENSG00000228716 | |
| DISC2 | NONHSAT010191 | DISC1-AS1, DISC1OS, NCRNA00015 | disrupted in schizophrenia 2 (non-protein coding) |
| EGO | NONHSAT087635 | EGOT, ENSG00000235947 | Eosinophil granule ontogeny (EGO) RNA |
| Emx2os | lnc-PDZD8-3:1 | ENSG00000229847 | Emx2 opposite strand transcript. |
| Evf2 | lnc-DLX5-3:1 | Evf-2, Dlx6as1, Dlx6os1, ENSG00000231764 | |
| GAS5 | NONHSAT007663 | SNHG2, ENSG00000234741 | |
| Gomafu | lnc-CRYBA4-2:1 | MIAT, RNCR2, C22orf35, LINC00066, NCRNA00066, ENSG00000225783 | MIAT: myocardial infarction associated transcript ((Ishii 2006)). RNCR2: retinal noncoding RNA 2 ((Blackshaw 2004)). |
| H19 | NONHSAT017465 | Q96MK8,ENSG00000130600 | H19, imprinted maternally expressed transcript (non-protein coding) |
| HAR1A | lnc-BIRC7-2:1 | HAR1F, ENSG00000238820 | highly accelerated region 1A |
| HAR1B | ENST00000447910.2 | HAR1R, ENSG00000231133 | highly accelerated region 1B |
| HOTAIR | NONHSAT028508 | Gm16258, Hox antisense intergenic RNA, ENSG00000228630 | Hox antisense intergenic RNA |
| HOTAIRM1 | lnc-EVX1-12:1 | HIT06113, HIT92376, linc1548, ENSG00000233429 | HOXA transcript antisense RNA, myeloid-specific 1 |
| HOTTIP | NONHSAT119717 | HOXA13as, HIT18844, NCRNA00213, ENSG00000243766 | HOXA transcript at the distal tip |
| Hoxa11as | NONHSAT119704 | Hoxa11s, Hoxa11os, NCRNA00076, ENSG00000240990 | HOXA11 antisense RNA |
| HOXA3as | NONHSAT119676 | HIT12844, HIT94153, HOXA-AS2, ENSG00000253552 | N/A |
| HOXA6as | lnc-EVX1-9:1 | HIT16800 | N/A |
| HULC | NONHSAT107640 | ENSG00000251164 | hepatocellular carcinoma up-regulated long non-coding RNA |
| IPW | NONHSAT041063 | NCRNA00002 | imprinted in Prader-Willi syndrome |
| Jpx | lnc-ZCCHC13-1:1 | Enox, NCRNA00183, ENSG00000225470 | Enox (expressed neighbor of Xist) |
| Kcnq1ot1 | NONHSAT017524 | LIT1, KvLQT1-AS, KvLQT1OT1, ENSG00000269821 | Kcnq1ot1: Kcnq1 opposite transcript 1;LIT1: long QT intronic transcript 1 |
| KRASP1 | NONHSAT113225 | ENSG00000220635 | KRAS Pseudogene 1 |
| LINC00568 | ENST00000416894.1 | Noncoding RNA activating1: ncRNA-a1, RP11-54A4.8, ENSG00000228126.1, FALEC,FAL1 | focally amplified long non-coding RNA in epithelial cancer |
| lincRNA-RoR | NONHSAT059436 | lincRNA-Regulator of Reprogramming, lincRNA-ST8SIA3, ENSG00000258609 | long intergenic non-protein coding RNA, regulator of reprogramming |
| LOC100887755 | lnc-SNAI1-1:1 | Noncoding RNA activating7: ncRNA-a7, ENST00000431460.1,ENSG00000231265,TRERNA1 | translation regulatory long non-coding RNA 1 |
| LOC285194 | NONHSAT091315 | LSAMP-AS3, ENSG00000243197,TUSC7 | tumor suppressor candidate 7 (non-protein coding) |
| LUST | NONHSAT089783 | Je2, ENSG00000003756 | LUCA-15-specific transcript. |
| Malat1 | ENST00000534336.1 | Neat2, ENSG00000251562 | Malat1: Metastasis-associated lung adenocarcinoma transcript 1; Neat2: Nuclear enriched abundant transcript |
| mascRNA | lnc-SCYL1-1:5 | Malat1 | mascRNA (MALAT1-associated small cytoplasmic RNA) |
| MEG3 | NONHSAT039745 | Gtl2, ENSG00000214548 | maternally expressed 3 (non-protein coding) |
| ncR-uPAR | NONHSAT102247 | NCRUPAR, ENSG00000225407 | non-protein coding RNA, upstream of F2R/PAR1 |
| NDM29 | lnc-C11orf16-1:1 | 29A | neuroblastoma differentiation marker 29 (Castelnuovo (2010), Pagano (2007)). |
| Nespas | lnc-CTSZ-5:1 | Gnas-as, GNAS antisense transcript, GNAS1as, SANG, ENSG00000235590 | Nespas: neuroendocrine secretory protein (Nesp) antisense. |
| NRON | NONHSAT134764 | ENSG00000253079 | non-protein coding RNA, repressor of NFAT |
| NTT | NONHSAT115106 | noncoding transcript in T cells. | |
| Otx2os1 | lnc-C14orf101-5:1 | OTX2-AS1, ENSG00000248550 | OTX2 opposite strand transcript 1 |
| PANDA | lnc-CDKN1A-1:1 | P21 associated ncRNA DNA damage activated, PANDA antisense RNA, ENSG00000213500, PANDAR | promoter of CDKN1A antisense DNA damage activated RNA |
| PCGEM1 | NONHSAT076153 | ENSG00000227418; PCAT9; LINC00071; NCRNA00071 lncRNA | Prostate-specific transcript 1 |
| PDZK1IP1-AS1 | ENST00000429328.2 | Noncoding RNA activating4: ncRNA-a4, PDZK1IP1 antisense RNA 1,ENSG00000224805,LINC00853 | long intergenic non-protein coding RNA 853 |
| PRINS | NONHSAT011777 | ENSG00000238115 | Psoriasis susceptibility-related RNA Gene Induced by Stress |
| PTENP1 | NONHSAT130775 | PTENpg1, PTEN2, ENSG00000237984 | PTEN Pseudogene 1 |
| Rian | ENST00000553584.1 | Irm, MEG8 and Bsr, linc1458, ENSG00000258399 | Rian: RNA Imprinted and Accumulated in Nucleus;Irm: Imprinted RNA near Meg3/Gtl2;MEG8: Maternally expressed gene 8 |
