MORF3 - Plant Editosome Database

Editing Details

Species

Gene ID

Organelle

Edited Gene

Position

Region

Editing Type

Codon

Amino Acid

Molecular Effect

Experiment Details

Arabidopsis thaliana

AT3G06790

Mitochondrion

atp4

395

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

ccmB

554

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

ccmB

576

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	Increased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	30.00%	Low	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

ccmFc

123

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

ccmFc

415

CDS

C-to-U

CUC=>UUC

L=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

ccmFc

CDS

C-to-U

CCU=>CUU

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	40.00%	Medium	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

ccmFn1

289

CDS

C-to-U

CUU=>UUU

L=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

ccmFn1

709

CDS

C-to-U

CCU/CCU=>UCU/UUU

P=>S/F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

ccmFn2

320

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	Increased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

cob

118

CDS

C-to-U

CCG=>UCG

P=>S

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

cox3

314

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

144

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

145

CDS

C-to-U

CCG=>UCG

P=>S

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

361

CDS

C-to-U

CUC=>UUC

L=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

377

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

406

CDS

C-to-U

CCU/CCU=>UCU/UUU

P=>S/F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	30.00%	Low	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

530

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	10.00%	Poor	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

649

CDS

C-to-U

CUC=>UUC

L=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

665

CDS

C-to-U

UCC/UCC=>UUC/UUU

S=>F/F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

666

CDS

C-to-U

UCC/UCC=>UCU/UUU

S=>S/F

Synonymous/Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

693

CDS

C-to-U

AUC=>AUU

I=>I

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

mttB

CDS

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad1

743

CDS

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad1

755

CDS

C-to-U

CCG=>CUG

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad2

1433

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad2

558

CDS

C-to-U

UCC=>UCU

S=>S

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	30.00%	Low	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad2

CDS

C-to-U

UCC=>UUC

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad2

695

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad2

821

CDS

C-to-U

UCU=>UUU
NA=>NA

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807
Columbia (Col-0)	WT	Control	Control	No mutant	Normal	NA	NA	NA	100.00%	Complete	None	41025883
GK-109E12.01	morf3-1	A homozygous T-DNA insertion	A homozygous T-DNA insertion line carrying a T-DNA insertion at the gene locus AT3G06790	Knockout; Homozygous	Rosette leaves of mutant plants after 3 weeks had approximately the size of the rosette leaves of wild-type plants after 2 weeks; Inflorescence development started after 4 weeks in wild-type plants but only after 6 weeks in the mutant; The inflorescence of the mutant was still smaller and less branched after 7 weeks; Root growth was substantially delayed in the mutant	NA	NA	NA	0.00%	Unedited	Absent	41025883

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad3

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad4L

110

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad4L

131

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	70.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad5

1916

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad5

374

CDS

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad5

609

CDS

C-to-U

GCC/GCC=>GCU/GUU

A=>A/V

Synonymous/Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad7

213

CDS

C-to-U

GAC=>GAU

D=>D

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

nad7

739

CDS

C-to-U

CUU=>UUU
NA=>NA

L=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807
Columbia (Col-0)	WT	Control	Control	No mutant	Normal	NA	NA	NA	100.00%	Complete	None	41025883
GK-109E12.01	morf3-1	A homozygous T-DNA insertion	A homozygous T-DNA insertion line carrying a T-DNA insertion at the gene locus AT3G06790	Knockout; Homozygous	Rosette leaves of mutant plants after 3 weeks had approximately the size of the rosette leaves of wild-type plants after 2 weeks; Inflorescence development started after 4 weeks in wild-type plants but only after 6 weeks in the mutant; The inflorescence of the mutant was still smaller and less branched after 7 weeks; Root growth was substantially delayed in the mutant	NA	NA	NA	0.00%	Unedited	Absent	41025883

Arabidopsis thaliana

AT3G06790

Mitochondrion

rpl5

CDS

C-to-U

CCG/CCG=>UCG/UUG

P=>S/L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

rpl5

CDS

C-to-U

CCG/CCG=>CUG/UUG

P=>L/L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	30.00%	Low	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

rpl5

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

rps3

1344

CDS

C-to-U

AGC=>AGU

S=>S

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

rps4

299

CDS

C-to-U

CCA=>CUA
NA=>NA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	60.00%	High	None	22411807
Columbia (Col-0)	WT	Control	Control	No mutant	Normal	NA	NA	NA	60.00%	High	None	41025883
GK-109E12.01	morf3-1	A homozygous T-DNA insertion	A homozygous T-DNA insertion line carrying a T-DNA insertion at the gene locus AT3G06790	Knockout; Homozygous	Rosette leaves of mutant plants after 3 weeks had approximately the size of the rosette leaves of wild-type plants after 2 weeks; Inflorescence development started after 4 weeks in wild-type plants but only after 6 weeks in the mutant; The inflorescence of the mutant was still smaller and less branched after 7 weeks; Root growth was substantially delayed in the mutant	NA	NA	NA	0.00%	Unedited	Absent	41025883

Arabidopsis thaliana

AT3G06790

Mitochondrion

rps4

332

CDS

C-to-U

CCG=>CUG

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	50.00%	Medium	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

rps4

CDS

C-to-U

UCA=>UUA

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	20.00%	Low	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	90.00%	High	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

rps4

CDS

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	0.00%	Unedited	Absent	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Arabidopsis thaliana

AT3G06790

Mitochondrion

rps4

967

CDS

C-to-U

CAU=>UAU

H=>Y

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
GK-109E12.01	morf3-1	T-DNA Insertion	T-DNA is inserted in the first exon	Homozygous	Grow a bit more slowly than wild-type plants but otherwise display no detectably altered morphological phenotype in the greenhouse	Leaf	NA	Direct Sequencing of PCR Products	80.00%	High	Decreased	22411807
Col	WT	Control	Control	Control	Normal	Leaf	NA	Direct Sequencing of PCR Products	100.00%	Complete	None	22411807

Editing Factor:	MORF3
Synonym:	MULTIPLE ORGANELLAR RNA EDITING FACTOR 3
Description:	Encoding a mitochondrial editing factor involved at more than 40 sites; Assembly of complex I
Protein Family:	MORF
Subclass:	NA
Construct Structure:	NA
Gene ID & Species:	AT3G06790 (Arabidopsis thaliana)
Edited Gene(s):	atp4 ccmFn2 ccmB ccmFn1 ccmFc cox3 cob nad1 nad2 nad3 nad4L nad5 nad7 mttB rpl5 rps3 rps4
Editing Type(s):	C-to-U (98)
Publication(s):	[1] Disturbed RNA editing in MORF3-deficient Arabidopsis mitochondria leads to impaired assembly of complex I., Plant physiology, 2025. [PMID=41025883] [2] Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants., Proceedings of the National Academy of Sciences of the United States of America, 2012. [PMID=22411807]

Plant Editosome Database
a curated database of RNA editosome in plants

Summary

Editing Details