rpl5 - Plant Editosome Database - CNCB-NGDC

Summary

Gene: rpl5
Function: Ribosomal protein
Species: 16
Editing Factors:16 (DYW2, Lon1, MEF37, MEF8, MORF1, MORF3, MORF8, NUWA, ORRM2, ORRM3, ORRM4, OTP90, PAP2, PGN, REME1, RID4)
Editing Types:
C-to-U (297)
U-to-C (5)
Editing Sites: 306 (C-to-U: 297   U-to-C: 5   NA: 4)
External Link: NCBI Gene
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid
Arabidopsis thalianaMitochondrion10
C-to-U: 10
57808
57820
57831
57832
57837
57865
57942
58090
58102
58285
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCG=>CUG
CCG=>UCG
CCG=>CUG
CAC=>UAC
UCG=>UUG
CGC=>UGC
UCG=>UUG
UCG=>UUG
CCA=>CUA
S=>L
P=>L
P=>S
P=>L
H=>Y
S=>L
R=>C
S=>L
S=>L
P=>L
Asclepias syriacaMitochondrion1
NA: 1
90902-91432CDS+NANA=>NANA=>NA
Beta macrocarpaMitochondrion5
C-to-U: 5
370491
370840
370945
370950
370962
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>CUG
CCG=>UCG
CAC=>UAC
CCG=>CUG
CCG=>CUG
P=>L
P=>S
H=>Y
P=>L
P=>L
Beta vulgaris subsp. maritimaMitochondrion5
C-to-U: 5
111727
112076
112181
112186
112198
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>CUG
CCG=>UCG
CAC=>UAC
CCG=>CUG
CCG=>CUG
P=>L
P=>S
H=>Y
P=>L
P=>L
Beta vulgaris subsp. vulgarisMitochondrion4
C-to-U: 4
182144
182249
182254
182266
CDS
CDS
CDS
CDS
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>UCG
CAC=>UAC
CCG=>CUG
CCG=>CUG
P=>S
H=>Y
P=>L
P=>L
Brassica napusMitochondrion9
C-to-U: 9
202565
202577
202589
202594
202622
202699
202847
202859
203042
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCG=>CUG
CCG=>CUG
CAC=>UAC
UCG=>UUG
CGC=>UGC
UCG=>UUG
UCG=>UUG
CCA=>CUA
S=>L
P=>L
P=>L
H=>Y
S=>L
R=>C
S=>L
S=>L
P=>L
Citrullus lanatusMitochondrion9
C-to-U: 9
274374
274386
274431
274505
274508
274656
274668
274851
274854
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UYA
CCG=>CYG
UCG=>UUG
CCG=>UCG
CGC=>UGC
UCG=>UYG
UCG=>UYG
CCA=>CUA
CCG=>CUG
S=>S/L
P=>P/L
S=>L
P=>S
R=>C
S=>S/L
S=>S/L
P=>L
P=>L
Cucurbita pepoMitochondrion8
C-to-U: 8
83122
83134
83179
83253
83256
83404
83599
83602
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCG=>CUG
UCG=>UUG
CCG=>UCG
CGC=>UGC
GCG=>GYG
CCA=>CUA
CCG=>CUG
S=>L
P=>L
S=>L
P=>S
R=>C
A=>A/V
P=>L
P=>L
Lotus japonicusMitochondrion16
C-to-U: 16
276348
276351
276546
276694
276771
276799
276816
276828
77154
77157
77352
77500
77577
77605
77622
77634
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>CUG
CCA=>CUA
UCG=>UUG
CGC=>UGC
UCG=>UUG
CAC=>UAC
CCG=>CUG
UCA=>UUA
CCG=>CUG
CCA=>CUA
UCG=>UUG
CGC=>UGC
UCG=>UUG
CAC=>UAC
CCG=>CUG
UCA=>UUA
P=>L
P=>L
S=>L
R=>C
S=>L
H=>Y
P=>L
S=>L
P=>L
P=>L
S=>L
R=>C
S=>L
H=>Y
P=>L
S=>L
Millettia pinnataMitochondrion8
C-to-U: 8
378009
378021
378038
378066
378146
378294
378489
378492
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCG=>CUG
CAC=>UAC
UCG=>UUG
CGC=>UGC
UCG=>UUG
CCA=>CUA
CCG=>CUG
S=>L
P=>L
H=>Y
S=>L
R=>C
S=>L
P=>L
P=>L
Nelumbo nuciferaMitochondrion12
C-to-U: 12
511812
511840
511852
511864
511869
511897
511971
511974
512125
512137
512320
512323
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>UCA
UCA=>UUA
CCG=>CUG
CCG=>CUG
CAC=>UAC
UCG=>UUG
CCG=>UCG
CGC=>UGC
UCG=>UUG
UCG=>UUG
CCA=>CUA
CCG=>CUG
P=>S
S=>L
P=>L
P=>L
H=>Y
S=>L
P=>S
R=>C
S=>L
S=>L
P=>L
P=>L
Ophioglossum californicumMitochondrion9
C-to-U: 8
U-to-C: 1
187749
187812
187991
188188
188196
188311
188345
188348
188383
3'UTR
3'UTR
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
UCC=>UCU
UAG=>CAG
CCU=>CUU
CUU=>UUU
UAC=>UAU
CAC=>CAU
NA=>NA
NA=>NA
NA=>NA
S=>S
TERM=>Q
P=>L
L=>F
Y=>Y
H=>H
NA=>NA
Oryza sativa Japonica GroupMitochondrion1
C-to-U: 1
343402CDS-C-to-UCAC=>UACH=>Y
Psilotum nudumMitochondrion18
C-to-U: 17
U-to-C: 1
127758
127825
127847
127853
127918
127944
127962
128021
128082
128138
128185
128382
128415
128513
128518
128617
128618
128704
3'UTR
3'UTR
3'UTR
3'UTR
3'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
5'UTR
5'UTR
5'UTR
5'UTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
UCA=>UUA
CCA=>CUA
UUC=>UUU
UCG=>UUG
CUC=>CUU
UGA=>CGA
UCG=>UUG
CCU=>CUU
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
S=>L
P=>L
F=>F
S=>L
L=>L
TERM=>R
S=>L
P=>L
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhazya strictaMitochondrion8
C-to-U: 8
490692
490704
490721
490749
490818
490820
491166
491169
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCG=>CUG
CAC=>UAC
UCG=>UUG
CCG=>CUG
CGC=>UGC
CCA=>CUA
CCG=>CUG
S=>L
P=>L
H=>Y
S=>L
P=>L
R=>C
P=>L
P=>L
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Sep 2026 (version 2.0)