Glycine max - Plant Editosome Database - BIG Data Center

Summary

Species: Glycine max
NCBI Taxonomy: 3847
Organelle:Chloroplast (NC_007942.1); Mitochondrion (NC_020455.1)
Editing Factors:2 (YL, GmPPR4)
Edited Genes:8
Editing Events:28
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
ndhD2120616
120616
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
psbL262705-62821
62705-62821
CDS
CDS
-
-
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA

( NA = Data Not Available )

Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
ccmFc457359-58137
62238-62787
62238-62787
57359-58137
CDS
CDS
CDS
CDS
+
+
+
+
mRNA
mRNA
mRNA
mRNA
NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
mttB2400971-401693
400971-401693
CDS
CDS
+
+
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
nad110340687-340745
55229-55420
337279-337537
163153-163539
53706-53786
53706-53786
163153-163539
337279-337537
340687-340745
55229-55420
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
+
-
-
+
+
-
-
-
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
nad4L-12145776-146078
145776-146078
CDS
CDS
+
+
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
nad4L-22205886-206188
205886-206188
CDS
CDS
-
-
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rps10447253-47502
50332-50444
50332-50444
47253-47502
CDS
CDS
CDS
CDS
+
+
+
+
mRNA
mRNA
mRNA
mRNA
NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)