rps10 - Plant Editosome Database - BIG Data Center

Summary

Gene: rps10
Function: Ribosomal protein
Species: 43
Editing Factors:1 (SlORRM4)
Editing Types:
C-to-U (101)
Editing Events: 296 (NA: 195   C-to-U: 101)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Asclepias syriacaMitochondrion4
NA: 4
678109-678352
679136-679218
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Batis maritimaMitochondrion2
NA: 2
166041-166153
166983-167235
CDS
CDS
-NA
NA
NA=>AUG
NA=>AUG
NA=>M
NA=>M
Bupleurum falcatumMitochondrion4
NA: 4
270280-270529
273311-273393
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cannabis sativaMitochondrion4
NA: 4
175510-175586
176429-176678
CDS
CDS
CDS
CDS
-NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Capsicum annuumMitochondrion4
NA: 4
223478-223727
224501-224583
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Carica papayaMitochondrion2
NA: 2
192841-192923
193734-193983
CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Castilleja paramensisMitochondrion2
NA: 2
296363-296612
297389-297501
CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Citrullus lanatusMitochondrion5
C-to-U: 5
377835
377849
378071
378980
379009
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
ACG=>AUG
CGG=>UGG
UCG=>UUG
CGC=>UGC
CGA=>UGA
T=>M
R=>W
S=>L
R=>C
R=>TERM
Cucumis sativusMitochondrion2
NA: 2
1554211-1554460
1555546-1555628
CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cucurbita pepoMitochondrion5
C-to-U: 5
981465
981479
981701
982575
982604
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGA=>UGA
ACG=>AUG
UCG=>UYG
CGG=>UGG
CGC=>UGC
R=>TERM
T=>M
S=>S/L
R=>W
R=>C
Cycas taitungensisMitochondrion2
C-to-U: 2
157532CDS
CDS
-C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
Erythranthe guttataMitochondrion2
NA: 2
313037-313119
313892-314141
CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Ginkgo bilobaMitochondrion1
NA: 1
52796-53119CDS-NANA=>NANA=>NA
Glycine maxMitochondrion4
NA: 4
47253-47502
50332-50444
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium arboreumMitochondrion4
NA: 4
184298-184547
185397-185479
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium barbadenseMitochondrion4
NA: 4
79825-79907
80757-81006
CDS
CDS
CDS
CDS
-NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium davidsoniiMitochondrion4
NA: 4
187016-187265
188115-188197
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium harknessiiMitochondrion4
NA: 4
628530-628779
629629-629711
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium hirsutumMitochondrion4
NA: 4
630657-630906
631756-631838
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium raimondiiMitochondrion4
NA: 4
36716-36798
37648-37897
CDS
CDS
CDS
CDS
-NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium thurberiMitochondrion4
NA: 4
187057-187306
188156-188238
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Gossypium trilobumMitochondrion4
NA: 4
187058-187307
188157-188239
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hesperelaea palmeriMitochondrion4
NA: 4
138257-138367
139180-139437
CDS
CDS
CDS
CDS
-NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hibiscus cannabinusMitochondrion2
C-to-U: 2
191110-191359
192209-192321
CDS
CDS
+C-to-U
C-to-U
NA=>AUG
NA=>AUG
NA=>M
NA=>M
Hyoscyamus nigerMitochondrion1
C-to-U: 1
22146CDS+C-to-UACG=>AUGT=>M
Ipomoea nilMitochondrion4
C-to-U: 4
261347-261459
262362-262611
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
ACG=>AUG
ACG=>AUG
T=>M
T=>M
T=>M
T=>M
Lagerstroemia indicaMitochondrion4
NA: 4
125091-125309
126258-126371
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Liriodendron tulipiferaMitochondrion4
NA: 4
1315-1561
2400-2512
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lotus japonicusMitochondrion10
C-to-U: 10
379328
379342
379564
380601
380630
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGA=>UGA
CGG=>UGG
CGA=>UGA
CGG=>UGG
ACG=>AUG
ACG=>AUG
CGC=>UGC
UCG=>UUG
CGC=>UGC
UCG=>UUG
R=>TERM
R=>W
R=>TERM
R=>W
T=>M
T=>M
R=>C
S=>L
R=>C
S=>L
Millettia pinnataMitochondrion10
C-to-U: 10
83200
83214
83436
85960
85989
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGC=>UGC
CGA=>UGA
CGC=>UGC
CGA=>UGA
UCG=>UUG
ACG=>AUG
UCG=>UUG
ACG=>AUG
CGG=>UGG
CGG=>UGG
R=>C
R=>TERM
R=>C
R=>TERM
S=>L
T=>M
S=>L
T=>M
R=>W
R=>W
Nelumbo nuciferaMitochondrion8
C-to-U: 8
198854-198966
198875
198886
198915
200419-200668
200431
200653
200667
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
AUC=>AUU
CGA=>UGA
NA=>AUG
CGC=>UGC
UCG=>UUG
CGG=>UGG
ACG=>AUG
NA=>AUG
I=>I
R=>TERM
NA=>M
R=>C
S=>L
R=>W
U=>M
NA=>M
Nicotiana attenuataMitochondrion2
C-to-U: 2
168079CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
Nicotiana tabacumMitochondrion2
C-to-U: 2
131586CDS
CDS
-C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
Ophioglossum californicumMitochondrion8
C-to-U: 8
29185
29189
29197
29384
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
CCU=>UCU
UCG=>UUG
CGC=>UGC
UCU=>UUU
CCU=>UCU
UCG=>UUG
CGC=>UGC
S=>F
P=>S
S=>L
R=>C
S=>F
P=>S
S=>L
R=>C
Psilotum nudumMitochondrion3
C-to-U: 3
184731
184908
184961
5'UTR
5'UTR
5'UTR
NAC-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhazya strictaMitochondrion4
NA: 4
403434-403683
404532-404704
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Salvia miltiorrhizaMitochondrion2
NA: 2
127019-127129
128341-128592
CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Solanum lycopersicumMitochondrion6
NA: 6
314088-314337
315113-315225
CDS
CDS
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Solanum pennelliiMitochondrion4
NA: 4
7532-7781
8557-8669
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Vigna angularisMitochondrion2
NA: 2
216456-219622NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Vigna radiata var. radiataMitochondrion1
C-to-U: 1
397905CDS+C-to-UACG=>AUGT=>M
Vitis viniferaMitochondrion4
NA: 4
488758-489007
490060-490172
CDS
CDS
CDS
CDS
+NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Ziziphus jujubaMitochondrion4
NA: 4
20853-20935
21780-22029
CDS
CDS
CDS
CDS
-NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)