| Species: | Silene vulgaris |
| NCBI Taxonomy: | 42043 |
| Organelle: | Chloroplast (NC_016727.1); Mitochondrion (NC_016406.1) |
| Edited Genes: | 15 |
| Editing Events: | 56 |
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| atpA | 2 | 10136 10136 | CDS CDS | - - | mRNA mRNA | C-to-U C-to-U | UCC=>UCU UCC=>UCU | S=>S S=>S |
| clpP | 2 | 68367 68367 | CDS CDS | - - | mRNA mRNA | C-to-U C-to-U | CAU=>UAU CAU=>UAU | H=>Y H=>Y |
| matK | 2 | 2811 2811 | CDS CDS | - - | mRNA mRNA | C-to-U C-to-U | CAU=>UAU CAU=>UAU | H=>Y H=>Y |
| ndhA | 6 | 118006 118513 118738 118738 118513 118006 | CDS CDS CDS CDS CDS CDS | - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCC=>UUC UCA=>UUA UCA=>UUA UCA=>UUA UCA=>UUA UCC=>UUC | S=>F S=>L S=>L S=>L S=>L S=>F |
| ndhB | 16 | 140271 139626 139620 139536 139527 139376 139257 138939 138939 139257 139376 139527 139536 140271 139626 139620 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CCA=>CUA UCA=>UUA UCA=>UUA UCU=>UUU CCA=>CUA CAU=>UAU CCA=>CUA UCA=>UUA UCA=>UUA CCA=>CUA CAU=>UAU CCA=>CUA UCU=>UUU CCA=>CUA UCA=>UUA UCA=>UUA | P=>L S=>L S=>L S=>F P=>L H=>Y P=>L S=>L S=>L P=>L H=>Y P=>L S=>F P=>L S=>L S=>L |
| ndhD | 6 | 114318 114822 115203 114318 114822 115203 | CDS CDS CDS CDS CDS CDS | - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CCC=>CUC UCA=>UUA ACG=>AUG CCC=>CUC UCA=>UUA ACG=>AUG | P=>L S=>L T=>M P=>L S=>L T=>M |
| ndhG | 2 | 116929 116929 | CDS CDS | - - | mRNA mRNA | C-to-U C-to-U | ACA=>AUA ACA=>AUA | T=>I T=>I |
| petL | 2 | 64276 64276 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | CCU=>CUU CCU=>CUU | P=>L P=>L |
| psbL | 2 | 62669 62669 | CDS CDS | - - | mRNA mRNA | C-to-U C-to-U | ACG=>AUG ACG=>AUG | T=>M T=>M |
| psbZ | 2 | 33980 33980 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | UCA=>UUA UCA=>UUA | S=>L S=>L |
| rpoA | 2 | 77061 77061 | CDS CDS | - - | mRNA mRNA | C-to-U C-to-U | UCU=>UUU UCU=>UUU | S=>F S=>F |
| rpoB | 6 | 25268 25190 25175 25268 25175 25190 | CDS CDS CDS CDS CDS CDS | - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA UCA=>UUA UCG=>UUG UCA=>UUA UCG=>UUG UCA=>UUA | S=>L S=>L S=>L S=>L S=>L S=>L |
| rps2 | 2 | 14939 14939 | CDS CDS | - - | mRNA mRNA | C-to-U C-to-U | UCA=>UUA UCA=>UUA | S=>L S=>L |
| trnI-CAU | 2 | 83755-83828 83755-83828 | Exon Exon | - - | tRNA tRNA | C-to-U C-to-U | CAU=>UAU CAU=>UAU | H=>Y H=>Y |
( NA = Data Not Available )
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| trnI-CAT | 2 | 286691-286764 286691-286764 | Exon Exon | - - | tRNA tRNA | C-to-U C-to-U | CAU=>UAU CAU=>UAU | H=>Y H=>Y |
( NA = Data Not Available )