matK - Plant Editosome Database - BIG Data Center

Summary

Gene: matK
Function: Intron maturase
Species: 68
Editing Factors:12 (DYW2, MEF37, MORF2, MORF9, ORRM1, ORRM1,ORRM6, ORRM6, OsSLC1, OTP90, OZ1, PGN, QED1)
Editing Types:
U-to-C (67)
C-to-U (63)
Editing Events: 186 (U-to-C: 67   C-to-U: 63   NA: 56)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Alsophila spinulosaChloroplast1
NA: 1
1531-3033CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast3
NA: 1
U-to-C: 2
1473-2981
2714
2720
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Apostasia odorataChloroplast1
NA: 1
2019-3488CDS-NANA=>NANA=>NA
Arabidopsis lyrata subsp. lyrata MN47Chloroplast1
C-to-U: 1
2901NA+C-to-UNA=>NANA=>NA
Arabidopsis thalianaChloroplast2
C-to-U: 2
2865CDS
CDS
-C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
Asplenium pekinenseChloroplast2
NA: 1
U-to-C: 1
1409-2917
2659
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast2
NA: 1
U-to-C: 1
1388-2893
2635
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium anisopterumChloroplast4
C-to-U: 1
NA: 1
U-to-C: 2
1456-2958
2694
2700
2957
NA
NA
NA
CDS
+
-
C-to-U
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast3
NA: 1
U-to-C: 2
1457-2962
2698
2704
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast3
NA: 1
U-to-C: 2
1455-2957
2693
2699
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast4
C-to-U: 1
NA: 1
U-to-C: 2
1456-2958
2694
2700
2957
NA
NA
NA
CDS
+
-
C-to-U
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast2
NA: 1
U-to-C: 1
1444-2946
2688
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Christella appendiculataChloroplast3
NA: 1
U-to-C: 2
1457-2971
2707
2713
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cistanche phelypaeaPlastid2
NA: 2
34001-35432
91598-93028
CDS
CDS
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cocos nuciferaChloroplast4
C-to-U: 4
1863
2396
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
CAC=>UAC
CAC=>UAC
UUC=>UUU
UUC=>UUU
H=>Y
H=>Y
D=>F
D=>F
Conopholis americanaPlastid1
NA: 1
884-2113CDS-NANA=>NANA=>NA
Cuscuta exaltataChloroplast1
NA: 1
1452-3017CDS-NANA=>NANA=>NA
Cypripedium macranthosChloroplast2
C-to-U: 2
2317
2782
CDS
CDS
-C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
Cyrtomium devexiscapulaeChloroplast3
NA: 1
U-to-C: 2
1525-3027
2763
2769
NA
NA
CDS
+
-
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium falcatumChloroplast4
NA: 1
U-to-C: 3
1674-3176
1732
2912
2918
NA
NA
CDS
NA
+
-
U-to-C
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cystopteris chinensisChloroplast3
NA: 1
U-to-C: 2
1448-2950
2686
2692
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Dendrobium officinaleChloroplast3
C-to-U: 3
2125
2473
2914
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
CAC=>UAC
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
H=>Y
Deparia lanceaChloroplast3
NA: 1
U-to-C: 2
1442-2947
2683
2689
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast3
NA: 1
U-to-C: 2
1446-2948
2684
2690
NA
NA
CDS
+
-
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast3
NA: 1
U-to-C: 2
1450-2952
2688
2694
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deschampsia antarcticaPlastid4
C-to-U: 4
1940
2849
2867
2872
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
CUC=>UUC
CAU=>UAU
ACC=>AUC
CCU=>UCU
L=>F
H=>Y
U=>I
P=>S
Diplaziopsis cavalerianaChloroplast2
NA: 1
U-to-C: 1
1432-2943
2676
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast3
NA: 1
U-to-C: 2
1455-2966
2693
2699
NA
NA
CDS
+
-
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast3
NA: 1
U-to-C: 2
1462-2964
2700
2706
NA
NA
CDS
+
-
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast3
NA: 1
U-to-C: 2
1433-2935
2671
2677
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast3
NA: 1
U-to-C: 2
1441-2943
2679
2685
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast3
NA: 1
U-to-C: 2
1445-2947
2683
2689
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast3
NA: 1
U-to-C: 2
1460-2962
2698
2704
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplopterygium glaucumChloroplast1
NA: 1
15502-17019NA-NANA=>NANA=>NA
Dryopteris decipiensChloroplast4
C-to-U: 1
NA: 1
U-to-C: 2
1461-2966
2702
2708
2965
NA
CDS
NA
NA
+
-
C-to-U
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Forsythia suspensaChloroplast5
C-to-U: 5
2413
2482
3016
3202
3391
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
CAC=>UAC
CGG=>UGG
CCU=>UCU
H=>Y
H=>Y
H=>Y
R=>W
P=>S
Hevea brasiliensisChloroplast3
C-to-U: 3
2738
3272
3757
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
CGG=>UGG
UCU=>UUU
CAU=>UAU
R=>W
S=>F
H=>Y
Homalosorus pycnocarposChloroplast2
NA: 1
U-to-C: 1
1430-2953
2680
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hymenasplenium unilateraleChloroplast2
NA: 1
U-to-C: 1
1189-2685
2427
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast3
NA: 1
U-to-C: 2
1433-2914
2650
2656
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypseocharis bilobataChloroplast4
C-to-U: 4
3602
4332
4470
4716
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
CAC=>UAC
CUU=>UUU
UCA=>UUA
CUU=>UUU
H=>Y
L=>F
S=>L
L=>F
Isoetes flaccidaChloroplast1
NA: 1
60465-62120CDS-NANA=>NANA=>NA
Lepisorus clathratusChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
1495
242-1759
247
CDS
NA
NA
-
+
NA
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Linum usitatissimumChloroplast6
C-to-U: 6
NACDS
CDS
CDS
CDS
CDS
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
GCU=>GUU
CUU=>UUU
CUU=>UUU
UCA=>UUA
CUU=>UUU
S=>L
A=>V
L=>F
L=>F
S=>L
L=>F
Macrothelypteris torresianaChloroplast3
NA: 1
U-to-C: 2
1446-2951
2687
2693
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Mankyua chejuensisChloroplast2
C-to-U: 1
NA: 1
19809-21308
21307
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Marsilea crenataChloroplast1
NA: 1
4057-5583CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast3
NA: 1
U-to-C: 2
1423-2928
2664
2670
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Myriopteris lindheimeriChloroplast2
NA: 1
U-to-C: 1
1463-2965
2695
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
34655-36215NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast3
NA: 1
U-to-C: 2
1417-2916
2655
2661
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Orobanche californicaChloroplast1
NA: 1
2262-3695CDS-NANA=>NANA=>NA
Panicum virgatumChloroplast1
C-to-U: 1
1949CDSNAC-to-UNA=>NAH=>Y
Pelargonium alternansChloroplast6
C-to-U: 6
10337
10536
10725
10887
11073
11211
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAU=>UAU
UCA=>UUA
CUU=>UUU
CGG=>UGG
CAC=>UAC
CUU=>UUU
H=>Y
S=>L
L=>F
R=>W
H=>Y
L=>F
Phalaenopsis equestrisChloroplast3
C-to-U: 3
1995
2343
2528
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
UCU=>UUU
CAC=>UAC
CAU=>UAU
S=>F
H=>Y
H=>Y
Pseudophegopteris auritaChloroplast2
NA: 1
U-to-C: 1
1446-2951
2693
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast4
C-to-U: 1
NA: 1
U-to-C: 2
1441-2934
2670
2676
2933
NA
NA
CDS
NA
+
-
U-to-C
C-to-U
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Ptilidium pulcherrimumChloroplast1
NA: 1
27663-28766NA+NANA=>NANA=>NA
Rhachidosorus consimilisChloroplast2
NA: 1
U-to-C: 1
1447-2934
2676
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea pectinataChloroplast2
NA: 2
151392-152864
76748-78220
CDS
CDS
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Silene conicaChloroplast1
C-to-U: 1
NACDSNAC-to-UNA=>NANA=>NA
Silene latifoliaChloroplast1
C-to-U: 1
2780CDS-C-to-UCAU=>UAUH=>Y
Silene noctifloraChloroplast1
C-to-U: 1
2814CDS-C-to-UCAU=>UAUH=>Y
Silene vulgarisChloroplast2
C-to-U: 2
2811CDS
CDS
-C-to-U
C-to-U
CAU=>UAU
CAU=>UAU
H=>Y
H=>Y
Stegnogramma sagittifoliaChloroplast3
NA: 1
U-to-C: 2
1456-2961
2697
2703
NA
NA
CDS
+
-
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia macrochlaenaChloroplast3
NA: 1
U-to-C: 2
1444-2946
2682
2688
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia polystichoidesChloroplast3
NA: 1
U-to-C: 2
1455-2957
2693
2699
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast3
NA: 1
U-to-C: 2
1437-2945
2681
2687
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)