rpoB - Plant Editosome Database - CNCB-NGDC

Summary

Gene: rpoB
Function: RNA polymerase
Species: 76
Editing Factors:35 (CP31A, CP31B, CRR22, DUA1, DYW2, DYW2A, DYW2B, GRP23, IPI1, ISE2, MEF37, MORF2, MORF8, MORF9, NUWA, ORRM1, ORRM4, ORRM6, OTP90, OZ1, PAP2, PGN, PPR16, QED1, RIP1b, SL1, SLC1, SPL42, TRX z, WSL4, WSP1, YL, YLWS, YS1, YSS3)
Editing Types:
U-to-C (265)
C-to-U (225)
Editing Sites: 544 (U-to-C: 265   C-to-U: 225   NA: 54)
External Link: NCBI Gene
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
23054-26269CDS-NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
23253-26501CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast7
NA: 1
U-to-C: 6
23453-26668
24088
24937
24985
25951
26440
26542
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Anthoceros angustusChloroplast42
C-to-U: 27
U-to-C: 15
3621
3724
3934
3939
4261
4366
4462
4659
4675
4726
4737
4746
4752
5050
5077
5085
5109
5136
5206
5434
5440
5488
5640
5647
5677
5698
5701
5761
5979
6009
6064
6121
6175
6190
6369
6391
6402
6435
6505
6553
6627
6640
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
U-to-C
C-to-U
U-to-C
C-to-U
U-to-C
U-to-C
C-to-U
U-to-C
U-to-C
C-to-U
UAG=>CAG
UCA=>UUA
ACU=>AUU
CCA=>UCA
CCA=>CUA
UCA=>UUA
UCA=>UUA
UGG=>CGG
UCA=>UUA
ACU=>AUU
UAU=>CAU
UGA=>CGA
CGU=>UGU
UCA=>UUA
UCG=>UUG
CUU=>UUU
UGU=>CGU
UGU=>CGU
CCA=>CUA
UCA=>UUA
UCA=>UUA
UCU=>UUU
UGU=>CGU
UCA=>UUA
UUU=>UCU
GCU=>GUU
UCG=>UUG
UCA=>UUA
CCG=>UCG
CAU=>UAU
UUA=>UCA
CCG=>CUG
UUA=>UCA
UCU=>UUU
UGC=>CGC
CCU=>CUU
UAA=>CAA
UAA=>CAA
CCU=>CUU
GUC=>GCC
UGA=>CGA
CCA=>CUA
TERM=>Q
S=>L
T=>I
P=>S
P=>L
S=>L
S=>L
W=>R
S=>L
T=>I
Y=>H
TERM=>R
R=>C
S=>L
S=>L
L=>F
C=>R
C=>R
P=>L
S=>L
S=>L
S=>F
C=>R
S=>L
F=>S
A=>V
S=>L
S=>L
P=>S
H=>Y
L=>S
P=>L
L=>S
S=>F
C=>R
P=>L
TERM=>Q
TERM=>Q
P=>L
V=>A
TERM=>R
P=>L
Apopellia endiviifoliaChloroplast3
C-to-U: 3
7140
7691
8217
CDS
CDS
CDS
+
+
+
C-to-U
C-to-U
C-to-U
UCA=>UUA
CAU=>UAU
UCA=>UUA
S=>L
H=>Y
S=>L
Arabidopsis lyrata subsp. lyrata MN47Chloroplast3
C-to-U: 3
23796
25677
25890
NA
NA
NA
+
+
+
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Arabidopsis thalianaChloroplast3
C-to-U: 3
23898
25779
25992
CDS
CDS
CDS
-
-
-
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
UCU=>UUU
S=>L
S=>L
S=>L
Asplenium pekinenseChloroplast8
NA: 1
U-to-C: 7
23198-26419
23833
23983
24682
24730
25702
26191
26293
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast8
NA: 1
U-to-C: 7
23034-26249
23669
23819
24518
24566
25532
26021
26123
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium anisopterumChloroplast7
NA: 1
U-to-C: 6
23321-26536
23956
24805
24853
25819
26308
26410
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast7
NA: 1
U-to-C: 6
23347-26562
23982
24831
24879
25845
26334
26436
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast7
NA: 1
U-to-C: 6
23307-26522
23942
24791
24839
25805
26294
26396
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast7
NA: 1
U-to-C: 6
23347-26562
23982
24831
24879
25845
26334
26436
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast6
NA: 1
U-to-C: 5
23397-26612
24032
24881
24929
25895
26384
CDS
NA
NA
NA
NA
NA
-
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Christella appendiculataChloroplast7
NA: 1
U-to-C: 6
23345-26560
23980
24829
24877
25843
26332
26434
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cocos nuciferaChloroplast6
C-to-U: 6
24880
25306
26683
26740
26755
26833
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCU=>UUU
CCG=>CUG
UCG=>UUG
UCA=>UUA
UCG=>UUG
S=>L
S=>F
P=>L
S=>L
S=>L
S=>L
Curcuma flavifloraChloroplast1
NA: 1
24779-28015CDS-NANA=>NANA=>NA
Cuscuta reflexaChloroplast5
C-to-U: 5
21286
22720
22735
22813
22948
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCG=>UUG
UCA=>UUA
UCA=>UUA
UCU=>UUU
S=>F
S=>L
S=>L
S=>L
S=>F
Cypripedium macranthosChloroplast6
C-to-U: 6
24387
25764
25821
25836
25914
26049
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
CCG=>CUG
UCG=>UUG
UCA=>UUA
UCG=>UUG
UCU=>UUU
S=>F
P=>L
S=>L
S=>L
S=>L
S=>F
Cyrtomium devexiscapulaeChloroplast8
NA: 1
U-to-C: 7
23451-26666
24086
24236
24935
24983
25949
26438
26540
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium falcatumChloroplast8
NA: 1
U-to-C: 7
23590-26805
24225
24375
25074
25122
26088
26577
26679
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cystopteris chinensisChloroplast8
NA: 1
U-to-C: 7
23411-26626
24046
24196
24895
24943
25909
26398
26500
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Dendrobium officinaleChloroplast7
C-to-U: 7
24719
25211
26522
26579
26594
26672
26807
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
GCU=>GUU
CCG=>CUG
UCG=>UUG
UCA=>UUA
UCG=>UUG
UCU=>UUU
S=>L
A=>V
P=>L
S=>L
S=>L
S=>L
S=>F
Deparia lanceaChloroplast8
NA: 1
U-to-C: 7
23035-26250
23670
23820
24519
24567
25533
26022
26124
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast8
NA: 1
U-to-C: 7
23305-26520
23940
24090
24789
24837
25803
26292
26394
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast8
NA: 1
U-to-C: 7
23344-26559
23979
24129
24828
24876
25842
26331
26433
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deschampsia antarcticaPlastid4
C-to-U: 4
19502
19580
19595
19652
CDS
CDS
CDS
CDS
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
UCG=>UUG
CCG=>CUG
S=>L
S=>L
S=>L
P=>L
Diplaziopsis cavalerianaChloroplast7
NA: 1
U-to-C: 6
23422-26643
24057
24912
24960
25926
26415
26517
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast7
NA: 1
U-to-C: 6
23476-26691
24111
24960
25008
25974
26463
26565
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast6
NA: 1
U-to-C: 5
23291-26506
24775
24823
25789
26278
26380
CDS
NA
NA
NA
NA
NA
-
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast7
NA: 1
U-to-C: 6
23258-26473
23893
24742
24790
25756
26245
26347
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast7
NA: 1
U-to-C: 6
23299-26514
23934
24783
24831
25797
26286
26388
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast7
NA: 1
U-to-C: 6
23298-26513
23933
24782
24830
25796
26285
26387
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast6
NA: 1
U-to-C: 5
23307-26522
23942
24839
25805
26294
26396
CDS
NA
NA
NA
NA
NA
-
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplopterygium glaucumChloroplast1
NA: 1
38275-41472NA-NANA=>NANA=>NA
Dryopteris decipiensChloroplast8
NA: 1
U-to-C: 7
23231-26461
23866
24016
24730
24778
25744
26233
26335
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Festuca arundinaceaChloroplast1
NA: 1
19382-22621CDS+NANA=>NANA=>NA
Forsythia suspensaChloroplast6
C-to-U: 6
25601
26027
26355
27461
27476
27689
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCU=>UUU
CCC=>UCC
UCG=>UUG
UCA=>UUA
UCU=>UUU
S=>L
S=>F
P=>S
S=>L
S=>L
S=>F
Hevea brasiliensisChloroplast1
C-to-U: 1
15670CDS+C-to-UUCA=>UUAS=>L
Homalosorus pycnocarposChloroplast7
NA: 1
U-to-C: 6
23465-26680
24100
24949
24997
25963
26452
26554
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hymenasplenium unilateraleChloroplast6
NA: 1
U-to-C: 5
23335-26550
24819
24867
25833
26322
26424
CDS
NA
NA
NA
NA
NA
-
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast8
NA: 1
U-to-C: 7
23240-26455
23875
24025
24724
24772
25738
26227
26329
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypseocharis bilobataChloroplast6
C-to-U: 6
79603
80197
81016
81463
81478
82001
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
GCU=>GUU
GCG=>GUG
UCG=>UUG
UCA=>UUA
CUU=>UUU
S=>L
A=>V
A=>V
S=>L
S=>L
L=>F
Isoetes flaccidaChloroplast1
NA: 1
82890-86108CDS-NANA=>NANA=>NA
Juglans cinereaChloroplast1
NA: 1
25844-29056CDS-NANA=>NANA=>NA
Lepisorus clathratusChloroplast7
NA: 1
U-to-C: 6
22216-25431
23001
23700
23748
24714
25203
25305
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lygodium japonicumChloroplast1
NA: 1
23100-26294CDS-NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast7
NA: 1
U-to-C: 6
23436-26657
24071
24920
24968
25940
26429
26531
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Marsilea crenataChloroplast1
NA: 1
26158-29370CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast8
NA: 1
U-to-C: 7
23462-26677
24097
24247
24946
24994
25960
26449
26551
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Millettia pinnataChloroplast4
C-to-U: 4
34372
34585
34600
36052
CDS
CDS
CDS
CDS
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCA=>UUA
UCG=>UUG
UCU=>UUU
S=>F
S=>L
S=>L
S=>F
Myriopteris lindheimeriChloroplast5
NA: 1
U-to-C: 4
23607-26837
25850
26120
26609
26711
CDS
NA
NA
NA
NA
-
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nicotiana sylvestrisChloroplast4
C-to-U: 4
25515
26964
27042
27177
CDS
CDS
CDS
CDS
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCA=>UUA
UCA=>UUA
UCU=>UUU
S=>F
S=>L
S=>L
S=>F
Nicotiana tomentosiformisChloroplast4
C-to-U: 4
25439
26888
26966
27101
CDS
CDS
CDS
CDS
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
UCA=>UUA
UCA=>UUA
UCU=>UUU
S=>F
S=>L
S=>L
S=>F
Nothoceros aenigmaticusPlastid1
NA: 1
8202-11414NA+NANA=>NANA=>NA
Onoclea sensibilisChloroplast8
NA: 1
U-to-C: 7
23373-26588
24008
24158
24857
24905
25871
26360
26462
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Panicum virgatumChloroplast3
C-to-U: 3
21278
21356
21428
CDS
CDS
CDS
NA
NA
NA
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
S=>L
S=>L
P=>L
Pelargonium alternansChloroplast5
C-to-U: 5
31871
33051
33093
33209
33747
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
ACU=>AUU
CUU=>UUU
CUU=>UUU
UCG=>UUG
CUU=>UUU
T=>I
L=>F
L=>F
S=>L
L=>F
Phalaenopsis equestrisChloroplast7
C-to-U: 7
25152
26955
27012
27027
27105
27240
27549
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCG=>CUG
UCG=>UUG
UCA=>UUA
UCG=>UUG
UCU=>UUU
UCC=>UUC
S=>L
P=>L
S=>L
S=>L
S=>L
S=>F
S=>F
Pseudophegopteris auritaChloroplast7
NA: 1
U-to-C: 6
23140-26361
23775
24624
24672
25644
26133
26235
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast9
NA: 1
U-to-C: 8
23384-26599
24019
24169
24868
24916
25612
25882
26371
26473
CDS
NA
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast7
NA: 1
U-to-C: 6
23425-26640
24060
24210
24957
25923
26412
26514
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Saccharum hybrid cultivar SP80-3280Chloroplast4
C-to-U: 4
84014
84092
84107
84164
CDS
CDS
CDS
CDS
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
UCG=>UUG
CCG=>CUG
S=>L
S=>L
S=>L
P=>L
Schizaea elegansChloroplast8
NA: 1
U-to-C: 7
16916-20110
17179
17218
18379
19393
19882
19921
19963
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea pectinataChloroplast7
C-to-U: 1
NA: 1
U-to-C: 5
16147-19344
16149
16449
17613
19116
19155
19197
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
C-to-U
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Silene conicaChloroplast3
C-to-U: 3
23753
23768
23846
CDS
CDS
CDS
-
-
-
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
UCA=>UUA
S=>L
S=>L
S=>L
Silene latifoliaChloroplast3
C-to-U: 3
25243
25258
25336
CDS
CDS
CDS
-
-
-
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
UCA=>UUA
S=>L
S=>L
S=>L
Silene noctifloraChloroplast2
C-to-U: 2
24432
24447
CDS
CDS
-
-
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
S=>L
S=>L
Silene vulgarisChloroplast3
C-to-U: 3
25175
25190
25268
CDS
CDS
CDS
-
-
-
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
UCA=>UUA
S=>L
S=>L
S=>L
Solanum lycopersicumChloroplast5
C-to-U: 5
24676
25102
26551
26629
26764
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCU=>UUU
UCA=>UUA
UCA=>UUA
UCU=>UUU
S=>L
S=>F
S=>L
S=>L
S=>F
Stegnogramma sagittifoliaChloroplast7
NA: 1
U-to-C: 6
23367-26582
24002
24851
24899
25865
26354
26456
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Syntrichia ruralisChloroplast1
NA: 1
74601-77840NA-NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast8
NA: 1
U-to-C: 7
23252-26467
23887
24037
24736
24784
25750
26239
26341
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia polystichoidesChloroplast8
NA: 1
U-to-C: 7
23284-26499
23919
24069
24768
24816
25782
26271
26373
CDS
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast7
NA: 1
U-to-C: 6
23360-26575
23995
24844
24892
25858
26347
26449
CDS
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
NA
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Sep 2026 (version 2.0)