petL - Plant Editosome Database - BIG Data Center

Summary

Gene: petL
Function: Cytochrome b6/f complex
Species: 28
Editing Factors:18 (DG1, DYW2, ECB2, HEMC, ISE2, MEF37, MORF2, MORF8, MORF9, ORRM1, ORRM1,ORRM6, ORRM6, OTP90, OZ1, PGN, PPO1, TSL1, WTG1)
Editing Types:
C-to-U (25)
Editing Events: 43 (C-to-U: 25   NA: 18)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Anthoceros angustusChloroplast2
C-to-U: 2
84560
84569
CDS
CDS
+C-to-U
C-to-U
ACU=>AUU
GCU=>GUU
T=>I
A=>V
Apopellia endiviifoliaChloroplast2
C-to-U: 2
65364
65416
CDS
CDS
+C-to-U
C-to-U
UCA=>UCU
UCU=>UUU
S=>S
S=>F
Arabidopsis lyrata subsp. lyrata MN47Chloroplast1
C-to-U: 1
65995CDS+C-to-UCCU=>CUUP=>L
Arabidopsis thalianaChloroplast2
C-to-U: 2
65717CDS
CDS
+C-to-U
C-to-U
CCU=>CUU
CCU=>CUU
P=>L
P=>L
Bowenia serrulataChloroplast1
NA: 1
95937-96032CDS-NANA=>NANA=>NA
Cathaya argyrophyllaChloroplast2
C-to-U: 2
29140
29232
CDS
CDS
-C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Ceratozamia hildaeChloroplast1
NA: 1
96075-96170CDS-NANA=>NANA=>NA
Cryptocarya chinensisChloroplast1
NA: 1
68895-68990CDS+NANA=>NANA=>NA
Cycas taitungensisChloroplast2
C-to-U: 2
70181CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
Dioon spinulosumChloroplast1
NA: 1
69252-69347CDS+NANA=>NANA=>NA
Encephalartos lehmanniiChloroplast1
NA: 1
70661-70756CDS+NANA=>NANA=>NA
Hevea brasiliensisChloroplast1
C-to-U: 1
69927CDS+C-to-UCCU=>CUUP=>L
Lepidozamia peroffskyanaChloroplast1
NA: 1
70732-70827CDS+NANA=>NANA=>NA
Macrozamia mountperriensisChloroplast1
NA: 1
70736-70831CDS+NANA=>NANA=>NA
Myriopteris lindheimeriChloroplast1
C-to-U: 1
62294CDS+C-to-UCAA=>UAAQ=>TERM
Nothoceros aenigmaticusPlastid2
NA: 2
86167-86262NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Phalaenopsis equestrisChloroplast1
C-to-U: 1
66925CDS+C-to-UCCU=>CUUP=>L
Picea asperataChloroplast1
NA: 1
13251-13352CDS-NANA=>NANA=>NA
Picea crassifoliaChloroplast1
NA: 1
13252-13353CDS-NANA=>NANA=>NA
Picea morrisonicolaChloroplast1
NA: 1
76450-76551NA-NANA=>NANA=>NA
Pinus sylvestrisChloroplast1
NA: 1
33836-34018CDS-NANA=>NANA=>NA
Silene conicaChloroplast1
C-to-U: 1
62522CDS+C-to-UCCU=>CUUP=>L
Silene latifoliaChloroplast1
C-to-U: 1
64722CDS+C-to-UCCU=>CUUP=>L
Silene noctifloraChloroplast1
C-to-U: 1
54614CDS+C-to-UCCU=>CUUP=>L
Silene vulgarisChloroplast2
C-to-U: 2
64276CDS
CDS
+C-to-U
C-to-U
CCU=>CUU
CCU=>CUU
P=>L
P=>L
Stangeria eriopusChloroplast1
NA: 1
94468-94563CDS-NANA=>NANA=>NA
Takakia lepidozioidesChloroplast1
NA: 1
84835-84930NA+NANA=>NANA=>NA
Zamia furfuraceaChloroplast1
NA: 1
70285-70380CDS+NANA=>NANA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)