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Species
Manihot esculenta (cassava)
Hevea brasiliensis (rubber tree)
Mangifera indica (mango)
Ananas comosus (pineapple)
Saccharum officinarum (sugarcane)
Areca catechu (areca)
Musa acuminate (banana)
Theobroma cacao (cocoa)
Cocos nucifera (coconut)
Coffea canephora (coffee)
Litchi chinensis (litchi)
Dimocarpus longan (longan)
Elaeis guineensis (oilpalm)
Vanilla planifolia (vanilla)
Piper nigrum (pepper)
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TCOD
Sample
Sample Search
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BiosampleID:
ProjectID:
Sample Name:
Cultivar:
Country:
Provider:
Assay Type:
All
WGS
RNA-Seq
Species:
All
Cassava
Rubber tree
Mango
Pineapple
Sugarcane
Banana
Oilpalm
Cocoa
Coconut
Coffee
Litchi
Longan
Vanilla
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Sample List
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Showing 1 to 10 of 2,048 entries
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SampleID
BioSampleID
gvcf/vcf
Bam
ProjectID
SampleName
CultivarInfo
CultivarID
Organism
Tissue
Country
BiomaterialProvider
#Runs
AssayType
Platform
Instrument
LibraryLayout
Disease
Age
Treatment
Description
Overall Alignment Rate
TCODI00001
SAMN13053640
TCODP0001
SM2323-6
Landrace_Breeding_line
-
cassava
not collected
Colombia
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
TCODI00002
SAMN13053639
TCODP0001
SM2300-1
Landrace_Breeding_line
-
cassava
not collected
Colombia
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
TCODI00003
SAMN13053638
TCODP0001
SM610-1
Landrace_Breeding_line
-
cassava
not collected
Colombia
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
TCODI00004
SAMN13053566
TCODP0001
SC8013
Landrace_Breeding_line
-
cassava
not collected
China
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
TCODI00005
SAMN13053637
TCODP0001
MCOL1468
Landrace_Breeding_line
-
cassava
not collected
Colombia
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
TCODI00006
SAMN13053636
TCODP0001
MCOL22
Landrace_Breeding_line
-
cassava
not collected
Colombia
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
TCODI00007
SAMN13053635
TCODP0001
CM7595-1
Landrace_Breeding_line
mesb1190
cassava
not collected
Colombia
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
TCODI00008
SAMN13053634
TCODP0001
CM6740-7
Landrace_Breeding_line
-
cassava
not collected
Colombia
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
TCODI00009
SAMN13053633
TCODP0001
CM4040-1
Landrace_Breeding_line
-
cassava
not collected
Colombia
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
TCODI00010
SAMN13053632
TCODP0001
CM3993-9
Landrace_Breeding_line
-
cassava
not collected
Colombia
ITBB
1
WGS
ILLUMINA
Illumina NovaSeq 6000
PAIRED
-
-
-
-
-
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