Silene latifolia - Plant Editosome Database - CNCB-NGDC

Summary

Species: Silene latifolia
NCBI Taxonomy: 37657
Organelle:Chloroplast (NC_016730.1)
Edited Genes:13
Editing Sites:26
Gene Editing Sites Genomic Position Region Strand RNA Type Codons Amino Acids
atpA110197CDS-mRNAC-to-UUCC=>UCUS=>S
clpP168834CDS-mRNAC-to-UCAU=>UAUH=>Y
matK12780CDS-mRNAC-to-UCAU=>UAUH=>Y
ndhA3118134
118641
118866
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
UCC=>UUC
UCA=>UUA
UCA=>UUA
S=>F
S=>L
S=>L
ndhB8139104
139422
139541
139692
139701
139785
139791
140436
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
CAU=>UAU
CCA=>CUA
UCU=>UUU
UCA=>UUA
UCA=>UUA
CCA=>CUA
S=>L
P=>L
H=>Y
P=>L
S=>F
S=>L
S=>L
P=>L
ndhD3114450
114954
115335
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
CCU=>CUU
UCA=>UUA
ACG=>AUG
P=>L
S=>L
T=>M
petL164722CDS+mRNAC-to-UCCU=>CUUP=>L
psbF163172CDS-mRNAC-to-UUCU=>UUUS=>F
psbL163100CDS-mRNAC-to-UACG=>AUGT=>M
psbZ134120CDS+mRNAC-to-UUCA=>UUAS=>L
rpoB325243
25258
25336
CDS
CDS
CDS
-
-
-
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
UCA=>UUA
S=>L
S=>L
S=>L
rps2115000CDS-mRNAC-to-UUCA=>UUAS=>L
trnI-CAU184201-84274Exon-tRNAC-to-UCAU=>UAUH=>Y

( NA = Data Not Available )

Last update: Sep 2026 (version 2.0)