psbF - Plant Editosome Database - BIG Data Center

Summary

Gene: psbF
Function: Photosystem II complex
Species: 45
Editing Factors:12 (DYW2, LPA66, MEF37, MORF2, MORF9, ORRM1, ORRM1,ORRM6, ORRM6, OTP90, OZ1, PGN, YL)
Editing Types:
C-to-U (23)
G-to-A (4)
U-to-C (2)
Editing Events: 66 (NA: 37   C-to-U: 23   G-to-A: 4   U-to-C: 2)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
60122-60241CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast1
NA: 1
61202-61321CDS-NANA=>NANA=>NA
Anthoceros angustusChloroplast7
C-to-U: 4
NA: 1
U-to-C: 2
82118-82237
82140
82155
82158
82159
82161
82170
CDS
NA
NA
NA
NA
NA
NA
-
+
NA
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Arabidopsis lyrata subsp. lyrata MN47Chloroplast1
C-to-U: 1
64267NA+C-to-UNA=>NANA=>NA
Arabidopsis thalianaChloroplast2
C-to-U: 2
63985CDS
CDS
-C-to-U
C-to-U
UCU=>UUU
UCU=>UUU
S=>F
S=>F
Asplenium pekinenseChloroplast2
C-to-U: 1
NA: 1
60122-60241
60240
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast2
C-to-U: 1
NA: 1
60350-60469
60468
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast1
NA: 1
60756-60875CDS-NANA=>NANA=>NA
Athyrium sheareriChloroplast1
NA: 1
60892-61011CDS-NANA=>NANA=>NA
Athyrium sinenseChloroplast1
NA: 1
60810-60929CDS-NANA=>NANA=>NA
Austroblechnum melanocaulonChloroplast1
NA: 1
60944-61063CDS-NANA=>NANA=>NA
Cypripedium macranthosChloroplast1
C-to-U: 1
65478CDS-C-to-UUCU=>UUUS=>F
Cystopteris chinensisChloroplast1
NA: 1
60922-61041CDS-NANA=>NANA=>NA
Dendrobium officinaleChloroplast1
C-to-U: 1
64300CDS-C-to-UUCU=>UUUS=>F
Deparia lanceaChloroplast1
NA: 1
60643-60762CDS-NANA=>NANA=>NA
Deparia pycnosoraChloroplast1
NA: 1
60958-61077CDS-NANA=>NANA=>NA
Deparia viridifronsChloroplast1
NA: 1
60945-61064CDS-NANA=>NANA=>NA
Diplaziopsis cavalerianaChloroplast1
NA: 1
61353-61472CDS-NANA=>NANA=>NA
Diplaziopsis javanicaChloroplast1
NA: 1
61588-61707CDS-NANA=>NANA=>NA
Diplazium bellumChloroplast1
NA: 1
60892-61011CDS-NANA=>NANA=>NA
Diplazium dilatatumChloroplast1
NA: 1
60811-60930CDS-NANA=>NANA=>NA
Diplazium dushanenseChloroplast1
NA: 1
60826-60945CDS-NANA=>NANA=>NA
Diplazium striatumChloroplast1
NA: 1
60432-60551CDS-NANA=>NANA=>NA
Diplazium unilobumChloroplast1
NA: 1
60814-60933CDS-NANA=>NANA=>NA
Dryopteris decipiensChloroplast1
NA: 1
60880-60999CDS-NANA=>NANA=>NA
Homalosorus pycnocarposChloroplast1
NA: 1
61570-61689CDS-NANA=>NANA=>NA
Hymenasplenium unilateraleChloroplast1
NA: 1
61644-61763CDS-NANA=>NANA=>NA
Hypodematium crenatumChloroplast1
NA: 1
60692-60811CDS-NANA=>NANA=>NA
Hypseocharis bilobataChloroplast1
C-to-U: 1
8505CDS+C-to-UUCU=>UUUS=>F
Klebsormidium nitens NIES-2285Chloroplast2
G-to-A: 2
124141-124263CDS
CDS
+G-to-A
G-to-A
GUG=>AUG
GUG=>AUG
V=>M
V=>M
Macrothelypteris torresianaChloroplast1
NA: 1
60879-60998CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast1
NA: 1
60346-60465CDS-NANA=>NANA=>NA
Millettia pinnataChloroplast2
C-to-U: 2
63528CDS
CDS
-C-to-U
C-to-U
UCU=>UUU
UCU=>UUU
S=>F
S=>F
Myriopteris lindheimeriChloroplast2
C-to-U: 1
NA: 1
61051-61170
61169
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
83897-84016NA
NA
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast1
NA: 1
59940-60059CDS-NANA=>NANA=>NA
Panicum virgatumChloroplast1
C-to-U: 1
63090CDSNAC-to-UNA=>NANA=>NA
Pelargonium alternansChloroplast1
C-to-U: 1
76992CDS-C-to-UUCU=>UUUS=>F
Phalaenopsis equestrisChloroplast1
C-to-U: 1
65424CDS-C-to-UUCU=>UUUS=>F
Pseudophegopteris auritaChloroplast1
NA: 1
60475-60594CDS-NANA=>NANA=>NA
Rhachidosorus consimilisChloroplast1
NA: 1
61642-61761CDS-NANA=>NANA=>NA
Silene latifoliaChloroplast1
C-to-U: 1
63172CDS-C-to-UUCU=>UUUS=>F
Stegnogramma sagittifoliaChloroplast1
NA: 1
60654-60773CDS-NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast1
NA: 1
60788-60907CDS-NANA=>NANA=>NA
Woodsia polystichoidesChloroplast1
NA: 1
60537-60656CDS-NANA=>NANA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)