Phlegmariurus squarrosus - Plant Editosome Database - BIG Data Center

Summary

Species: Phlegmariurus squarrosus
NCBI Taxonomy: 73615
Organelle:Mitochondrion (NC_017755.1)
Edited Genes:13
Editing Events:30
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
atp9129217CDS+mRNAC-to-UCAA=>UAAQ=>TERM
cob156216NA+Unanotated TranscriptU-to-CNA=>NANA=>NA
cox14175622-175775
178654-179325
171578-172027
182233-182555
CDS
CDS
CDS
CDS
-
-
-
-
mRNA
mRNA
mRNA
mRNA
NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
cox32236086-236712
237489-237659
CDS
CDS
-
-
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
nad13141036
134070
130380
CDS
CDS
CDS
+
+
+
mRNA
mRNA
mRNA
C-to-U
U-to-C
C-to-U
CGA=>UGA
UAA=>CAA
ACG=>AUG
R=>TERM
TERM=>Q
T=>M
nad5696016
104937-105786
106736-107127
99039-99060
101969-102181
95612-96168
NA
CDS
CDS
CDS
CDS
CDS
+
-
-
-
-
-
Unanotated Transcript
mRNA
mRNA
mRNA
mRNA
mRNA
U-to-C
NA
NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
nad92127379
126831
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Novel3107128
236084
182556
NA
NA
NA
+
+
+
Unanotated Transcript
Unanotated Transcript
Unanotated Transcript
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rpl61396264CDS+mRNAC-to-UCAA=>UAAQ=>TERM
rps122240432-240812
240440
CDS
NA
-
+
mRNA
Unanotated Transcript
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rps132396271
396639
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
ACG=>AUG
CGA=>UGA
T=>M
R=>TERM
rps21126162CDS+mRNAC-to-UCAA=>UAAQ=>TERM
sdh42371737
371994
CDS
CDS
+
+
mRNA
mRNA
C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)