TCOD gene information

Detail information of 123224817

Position	Chr9:1164675-1167053
Length	2379bp
Strand	Forward(+)
Synonym	LOC123224817
Nr	XP_044504479.1
Uniprot	A0A067ESD8
Pfam	-
Interpro	-
GO	GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0046148 GO:0071704 GO:1901576
KEGG	K15746
Function from GFF	beta-carotene hydroxylase 2, chloroplastic isoform X1
Function from eggNOG-mapper	Belongs to the sterol desaturase family

Genome	GeneSeq	mRNASeq	cdsSeq	proteinSeq
mango_Alphonso	123224817	mrna_XM_044648542.1_29803	XP_044504477.1.cds	XP_044504477.1
mango_Alphonso	123224817	mrna_XM_044648543.1_29804	XP_044504478.1.cds	XP_044504478.1
mango_Alphonso	123224817	mrna_XM_044648544.1_29802	XP_044504479.1.cds	XP_044504479.1

Orthologous gene graph
Homologous gene list

Query Gene	Assembly for query gene	Orthologous gene	Paralogous gene	Assembly for homologous gene	Species for homologous gene

VarID	GeneID	Consequence Type \|Effect	Allele Change	Residue Change	TranscriptID	ProteinID

Expression level
Differential Expression

ProjectID	BioprojectID	#Samples	Organism	Description	Category

Up/Down	logFC	P-value	Adj-value	AveExpr	ProjectID	BioprojectID	Category	Comparison	Link to DEG