TCOD gene information

Detail information of 123227767

Position	Chr10:2630647-2636140
Length	5494bp
Strand	Forward(+)
Synonym	LOC123227767
Nr	-
Uniprot	-
Pfam	-
Interpro	-
GO	GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060
KEGG	K11968
Function from GFF	probable E3 ubiquitin-protein ligase ARI2
Function from eggNOG-mapper	E3 ubiquitin-protein ligase

Genome	GeneSeq	mRNASeq	cdsSeq	proteinSeq
mango_Alphonso	123227767	miscrna_XR_006504563.1_33162	-	-
mango_Alphonso	123227767	mrna_XM_044652885.1_33163	XP_044508820.1.cds	XP_044508820.1

Orthologous gene graph
Homologous gene list

Query Gene	Assembly for query gene	Orthologous gene	Paralogous gene	Assembly for homologous gene	Species for homologous gene

VarID	GeneID	Consequence Type \|Effect	Allele Change	Residue Change	TranscriptID	ProteinID

Expression level
Differential Expression

ProjectID	BioprojectID	#Samples	Organism	Description	Category

Up/Down	logFC	P-value	Adj-value	AveExpr	ProjectID	BioprojectID	Category	Comparison	Link to DEG