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Species
Manihot esculenta (cassava)
Hevea brasiliensis (rubber tree)
Mangifera indica (mango)
Ananas comosus (pineapple)
Saccharum officinarum (sugarcane)
Areca catechu (areca)
Musa acuminate (banana)
Theobroma cacao (cocoa)
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Coffea canephora (coffee)
Litchi chinensis (litchi)
Dimocarpus longan (longan)
Elaeis guineensis (oilpalm)
Vanilla planifolia (vanilla)
Piper nigrum (pepper)
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TCOD
Variations
min24728305
Detail information of min24728305
General Information
Organism
Mangifera indica
Assembly
mango_Alphonso
Type
INDEL
Position
Chr5:10479601
Alleles(Ref/Alt)
CGATGT/C
Minor Allel Frequency(MAF)
CGATGT:0.2500
Gene Annotation
VarID
GeneID
TranscriptID
ProteinID
Allele Change
Residue Change
Consequence Type |Effect
min24728305
123217504
XM_044638567.1
XP_044494502.1
-/-
-/-
upstream gene variant |MODIFIER
min24728305
123217593
XM_044638682.1
XP_044494617.1
-/-
-/-
downstream gene variant |MODIFIER
Population Diversity
SampleID
SampleName
Cultivar
CultivarId
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GenoType
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