Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/CHN/GACDC-18240441/2024 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Feng",
first "Yuliang",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Sichuan Center of Disease Control and Prevention",
div "Microbiology laboratory",
city "Chengdu",
country "China",
street "No. 6 Zhongxue Road",
email "fyl1234@126.com",
postal-code "610044"
}
}
},
cit {
authors {
names std {
{
name name {
last "Yin",
first "Liu",
initials "L."
}
},
{
name name {
last "Zhu",
first "Zuofang",
initials "Z."
}
},
{
name name {
last "Qin",
first "Xiaojia",
initials "X."
}
}
},
affil std {
affil "Sichuan Center of Disease Control and Prevention",
div "Microbiology laboratory",
city "Chengdu",
sub "Sichuan",
country "China",
street "No. 6 Zhongxue Road",
postal-code "610044"
}
},
date std {
year 2024,
month 11,
day 17
}
},
subtype new,
tool "table2asn 1.28.1021"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Severe acute respiratory syndrome coronavirus 2",
orgname {
mod {
{
subtype isolate,
subname "SARS-CoV-2/human/CHN/GACDC-18240441/2024"
},
{
subtype nat-host,
subname "Homo sapiens; Host_age: 17 years; Host_age_unit:
year; Host_sex: Male"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "China:Sichuan,Guang'an"
},
{
subtype isolation-source,
name "Oro-pharyngeal swab"
},
{
subtype collection-date,
name "2024-09-23"
},
{
subtype other,
name "Passage_details/history: Original; Original_lab: Guang'an
Center of Disease Control and Prevention; Original_address: No. 16 Wansheng
east Road, Sichuan, China"
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Genome-Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "CLC Genomics Workbench v. 23"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Genome-Assembly-Data-END##"
}
}
},
create-date std {
year 2024,
month 11,
day 17
}
},
seq-set {
seq {
id {
genbank { accession "C_AA098772", version 1}, gi 0670650650987721
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 29747,
topology linear,
strand ss,
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72E3BDFBC10701810EFEFFDFBFCF9472DDCB4BBBC37CC1C41D0D311C3DFD11BAEFCF15E102FF48
D74BFC4FC1D287EF7C5FDDF50EF1FAF539CDDEA143AC708AFE3057B5C53F0E3AEFCFF9F51E20B7
04C308A7A3FFAC71FC8F60854B571F3EF0C19C70EFFCF02DEE0FD0FFB0E353FFA3BF144004100B
E8E80B8B4A2FCF72E60C3E47FE0CEDDD25FF7CE85F828012AC3F400DF2A0FEEFC20CF8EBCFF00C
CF70911973CCA9B8FD5D2AFFDA7F2053EB23F9432B3C13472BF407F1F9FC0C82F3F875EB877DF4
AFA127AE7923CF3BABCDF417287FDCF00CC3803A053C48E7B21EE47E15DDD20102EC6F80D7D1EC
800A0DCD01F707F22D414120DCFBC8FD70EF101FB95FF4E0BFF065144FE4DEFCE7E8128620D241
EEF9E3CF7B5CCC3F6453FF67FC2EF3A2EDD71C0F038DDE7F1C3B73923D3FB0F02B0E0B4940D9D4
A901E80CF9E3CC3CC0F148E3FC4A79BCC9FA0F70427E3DC24CBAC3CE3C7ACC8D9F282DC07405FF
8888CFD0780DCD296B0405FB02B02B5C3EF1FD7F10D33AFD6151F3AEFAD1414C48B2CB1FDFF81F
713914907BFBA17002DC70FEBC0040EED0FD07D0EBF04A44AEF7C70B70400BF797F5043FA4884F
BE11C78E7B5B8D44847E23DF84F114EF7FEBAED2EF3045281031F7052BE7BDFCD2AEF079120B77
BE73D392341F1D71FA6EFCF712BDC3BFF4046E4A7BF0CAA7833B41074CE2EE13153EB92B3399CB
CD21D21C2DDB69A91B2EC9CB43534F9711CED1FAE4803D2F9F1DC30773E5315103FC73CBBC5120
3DC52EDCE142134B23EC43B13FBAE3D078392437FEF90CE92FFEC443C01B9FC1E8327BE0421001
15082FFE442D0103F10045143C0CFFAEBFC3FF440CF148D4D0050908AD3F3E08DC7FD040B847E4
8E7A7D340433AE3E5FAE33E79C885D3FB9100BF0697C7BFE517F9D12380E3E74311F791EF26AC4
347DEBE85FEB92B9E4F10314FE73903A7CCAFC3ACFA2F1120EF773881400F8F94143F0CB9CFA40
3D08747FFD4490B91FA007D08EEB414C39109FC0467EF0107C9D40FEB90FD0BBFC0E335FD1B7E1
02F8A782E40F8CAF8D12921F40BF92133B87410F0F2279203489F79C37E79C700ED22EEC7E8434
008BE3FFBA02A734DF3B5F574B49174EBB2DF7E4EE1F3B5791080207D1079D794FED38E802447F
5DB82BB7FBF40E9111EBFB0440A0FFCE051034F1C484113FBB7AC1EE3BEC3283ED04112FCE35FE
41F83C8F4F428A2F23033FC20D3134523BE3F2B84DDE93C39F4BEC04F40080F8597438AF9420FC
0E0DDD36375081FA02CE24B3300E94EB33FA72BFCC9E9F8F94CB0EB843CE7F9ECE1CBE7B2FB742
A7BEF7EE8D79E40FE3821877894B9D028B40F13C44C0607CE8FEFCE20DF443E81EC1FE090AE034
28E71D7D23FEF6671E418C58C425D1D5FDA3A7CFBE9BE47DF9EFFD2267D4034C1DD00223A41C91
DD42AEF47FBF907E7BEFBFB04BF1D117FE76F9E7A5F8255FF7737F39FCB71F7E48B301FEC20C30
E29FE9FE7A0396F500153C7F38E5073FDFE7A4C70FBC61CFB317C432EC1F7D0FB4F1F4AE3A4410
B5CFDE04E1C523EBAF31E003A837A2C021EEFB3C44BC7D1F4873C527B1D0743E2C484FAEF813BC
5F7D3710C03EF8E25E0813B503D110D86BD35A2FBC352C3A050FCE38161861C726E5FEC244278E
2C607CEC74F6FDA088CAC6F0CBC326C7DFFDF9FDBACF7E72F11C94D7C799F63EEE6C79E433EF06
E2DFB005F7FF1BF1DDBBC00DE0F7DC8BD78DF7ADC0607033CCF2FFDEFE81FC3FC94E913D41AC73
C5BE089F00275F820E8172C32BF5CF5F93A3FB7DC43F9739412832BFFB330F0BC3FF77A7BCE94B
07F07EFFB9F9E7BF120C0FA345AE83E73643A7EDFB29F8EE9D271F4F9F7F487BFB9B19BD4EEB4F
C35201C13DF741B94753A473DE14859F7202E076C3689EE35F6E84DF6CF9E845372867B84D0A17
97020347BE71346067F7CF103EA27D926EC92B874AFF9E4C4B67128FA41CC0F011214F52C92E10
CF9FE7EC4B0B84123BF4DDBE1FD2BC732488CF1C3CF39A1FF02FD4FE837E3C4D30174C3C00FCDC
2D1C1E20C0CF743C8E089050E88F7701813803CF7FDFA478C11D9C7EE27F3471422EEF22B104B1
FF00817E77DE81318A90F453F4D77278C103F91E1F9FC91D0FE7FE7ED7869B0046DCD2F1B948D2
FD1701EF4D2108A0BD081FC7750FFDF3EF9A432EFCC11FE7D11D008084838F81FD3C3E1F73FB9F
FC97F7BC75FBFC3CE7CF37FEBDD1F81E4234C3807ED1970181380FDFBFDF2834D107B2793F4508
3B2FC4B4EC7413414CECBE3856ED73D1F73DC0EB33C8B289C8034917F0F83EE6E8E29EBDC0D173
D2C4D8CDAC3CC4BF5EFC5FF10F0F94A05C0FAB2DFB2E6FBDBDCE087FF22CD386F6EFBFC8FD3701
8101F03B78C3A154034980E47593C6FEBA15D23D07A4B0520EBAA66340106DA550AFC5430C79B7
EBD167747413A428217C0F57628429BD43C114324B5238503E9C716089C52183DBAEB86B00E023
74B508EB3F71C5CA07A94827A1F573AE704086934CEAF9078A897E0C45008D13E91590D79C10E7
90DB9C41F5D0A0413E500A7DC6482A248AE92D0977DDBD74D1B2D904BD080F41D4A492C0607DD7
9C83A7A43A6B8E79DF9FE79E7E123E0427E22403B7AC0A50410429407B47080DE79E29F70825DA
4006C7947024C43B04427F6921BAD4810150A03FEA85281C3484281E3C404FA5903E443F955267
D26F7DA0ED993E93A0B445F6A06EBE17112B94D03E8E1023503F408D0B4FF9E0C24CF864C4013D
5141225C00A10020829E3807425F16488482012407B877DF5E7923FA38FDD4043E410D4E25B9E1
D074A5C074E485110A48EA73301BFD9FF5BF18CCCB71DFB920E0F76C1C4C910B23B2F07F0DD132
437F0D2EEC13CA8A1F80894513FD1712E0439CA889E5CCE822570EEC03C3FCB2E73553B8FF0C9F
7CA20C'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1ab"
},
location int {
from 213,
to 21493,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 1
},
{
id local id 3
}
}
},
{
id local id 5,
data gene {
locus "S"
},
location int {
from 21501,
to 25298,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 4
}
}
},
{
id local id 7,
data gene {
locus "ORF3a"
},
location int {
from 25307,
to 26134,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 6
}
}
},
{
id local id 9,
data gene {
locus "E"
},
location int {
from 26159,
to 26386,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 8
}
}
},
{
id local id 11,
data gene {
locus "M"
},
location int {
from 26437,
to 27105,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 10
}
}
},
{
id local id 13,
data gene {
locus "ORF6"
},
location int {
from 27116,
to 27301,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 12
}
}
},
{
id local id 15,
data gene {
locus "ORF7a"
},
location int {
from 27308,
to 27673,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 14
}
}
},
{
id local id 17,
data gene {
locus "ORF7b"
},
location int {
from 27670,
to 27801,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 16
}
}
},
{
id local id 19,
data gene {
locus "ORF8"
},
location int {
from 27808,
to 28173,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 18
}
}
},
{
id local id 21,
data gene {
locus "N"
},
location int {
from 28188,
to 29438,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 20
}
}
},
{
id local id 23,
data gene {
locus "ORF10"
},
location int {
from 29463,
to 29579,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 22
}
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 1",
location int {
from 13414,
to 13441,
strand plus,
id gi 0670650650987721
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 2",
location int {
from 13426,
to 13480,
strand plus,
id gi 0670650650987721
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 1",
location int {
from 29514,
to 29549,
strand plus,
id gi 0670650650987721
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 2",
location int {
from 29534,
to 29562,
strand plus,
id gi 0670650650987721
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' stem-loop II-like motif (s2m)",
location int {
from 29633,
to 29647,
strand plus,
id gi 0670650650987721
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25983", version 1}, gi 067065065075259831
},
descr {
title "ORF1ab polyprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 7093,
seq-data iupacaa "MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKD
GTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKN
GNKGAGGHRYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDL
LARAGKDSCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIK
TIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYL
PQNAVVKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGV
VGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKA
KKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNN
LVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIK
ESVQTFFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTE
VLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDD
TVIEVQGYKSVNIIFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYY
LFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDS
QQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTLVVNAAN
VYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQ
HEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
KPSVEQREQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVL
TAVVIPTKKASGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWN
LREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGY
VTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKR
GDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIK
PHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQI
ELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG
VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSK
ETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPY
PNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYRHYTPSFKKGAKLLHKPIVWHVNNAT
NKATYKPNTWCIRCLWSIKPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDII
LKPANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTT
NIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIW
FLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQIT
ISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFA
SFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFIS
DEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDSLRANNTKGSLPINVIVFD
GKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAK
NVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHIN
AQVAKSHNITLIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTL
VFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAA
VITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCY
DTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYR
SLPGVFCGVDAVNLFTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFI
VLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFN
GVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLTKALNDFSNSGS
DVLYQPPQISITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRK
SNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGS
FLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDR
WFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFD
VVRQCSGVTFQSAVKRTIKGTHHWLLLTILTSLLFLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFL
CLFLLPSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTL
VYKVYYGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFG
LFCLLNRYFRLTLGVYDYLVSTQEFKYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLL
SVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSL
PSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAM
QTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSK
IVQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTIKGGRFVLALL
SDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPAN
STVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKG
FCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNRVCGVSAARLTPCGTGTS
TDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFR
IDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVR
QALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDL
TKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPLTSFGPLVRKIFVDGVP
FVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNK
DFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIV
NNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQ
KLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHR
FYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYE
CLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTK
GPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYL
QYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQAVGACVLCNSQTSLRCGACIRRPFLCCKCCY
DHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAI
ATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRV
TKNSKVQIGEYTFEKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSN
VANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECF
DKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLCAKHYVYIGDPAQLPAPRTLLTKGTLEPEY
FNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREF
LTRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMS
DRDLYDKLQFTSLEIPRRNVATLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDVPGIPKDMTYRRL
ISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTD
FSRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLC
DRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVK
RVDWTIEYPIIGDELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEEL
FYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPF
FYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNT
FTRLQSLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILN
NLGVDIAANTVIWDYKRDAPAHISTIGVCSMTDIAKKPIETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGL
QPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEG
YAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIK
SQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKG
IMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCAT
VHTANKWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVT
NVNASSSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILS
LLSKGRLIIRENNRVVISSDVLVNN"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1ab polyprotein"
}
},
location int {
from 0,
to 7092,
id gi 067065065075259831
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
location int {
from 0,
to 179,
id gi 067065065075259831
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 180,
to 817,
id gi 067065065075259831
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 818,
to 2762,
id gi 067065065075259831
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2763,
to 3262,
id gi 067065065075259831
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3263,
to 3568,
id gi 067065065075259831
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3569,
to 3855,
id gi 067065065075259831
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3856,
to 3938,
id gi 067065065075259831
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3939,
to 4136,
id gi 067065065075259831
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4137,
to 4249,
id gi 067065065075259831
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4250,
to 4388,
id gi 067065065075259831
}
},
{
data prot {
name {
"RNA-dependent RNA polymerase"
},
processed mature
},
location int {
from 4389,
to 5320,
id gi 067065065075259831
}
},
{
data prot {
name {
"helicase"
},
processed mature
},
location int {
from 5321,
to 5921,
id gi 067065065075259831
}
},
{
data prot {
name {
"3'-to-5' exonuclease"
},
processed mature
},
location int {
from 5922,
to 6448,
id gi 067065065075259831
}
},
{
data prot {
name {
"endoRNAse"
},
processed mature
},
location int {
from 6449,
to 6794,
id gi 067065065075259831
}
},
{
data prot {
name {
"2'-O-ribose methyltransferase"
},
processed mature
},
location int {
from 6795,
to 7092,
id gi 067065065075259831
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25987", version 1}, gi 067065065075259871
},
descr {
title "ORF1a polyprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 4402,
seq-data iupacaa "MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKD
GTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKN
GNKGAGGHRYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDL
LARAGKDSCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIK
TIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYL
PQNAVVKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGV
VGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKA
KKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNN
LVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIK
ESVQTFFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTE
VLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDD
TVIEVQGYKSVNIIFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYY
LFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDS
QQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTLVVNAAN
VYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQ
HEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
KPSVEQREQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVL
TAVVIPTKKASGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWN
LREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGY
VTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKR
GDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIK
PHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQI
ELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG
VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSK
ETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPY
PNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYRHYTPSFKKGAKLLHKPIVWHVNNAT
NKATYKPNTWCIRCLWSIKPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDII
LKPANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTT
NIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIW
FLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQIT
ISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFA
SFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFIS
DEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDSLRANNTKGSLPINVIVFD
GKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAK
NVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHIN
AQVAKSHNITLIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTL
VFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAA
VITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCY
DTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYR
SLPGVFCGVDAVNLFTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFI
VLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFN
GVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLTKALNDFSNSGS
DVLYQPPQISITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRK
SNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGS
FLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDR
WFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFD
VVRQCSGVTFQSAVKRTIKGTHHWLLLTILTSLLFLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFL
CLFLLPSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTL
VYKVYYGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFG
LFCLLNRYFRLTLGVYDYLVSTQEFKYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLL
SVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSL
PSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAM
QTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSK
IVQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTIKGGRFVLALL
SDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPAN
STVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKG
FCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNGFAV"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1a polyprotein"
}
},
location int {
from 0,
to 4401,
id gi 067065065075259871
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
location int {
from 0,
to 179,
id gi 067065065075259871
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 180,
to 817,
id gi 067065065075259871
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 818,
to 2762,
id gi 067065065075259871
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2763,
to 3262,
id gi 067065065075259871
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3263,
to 3568,
id gi 067065065075259871
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3569,
to 3855,
id gi 067065065075259871
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3856,
to 3938,
id gi 067065065075259871
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3939,
to 4136,
id gi 067065065075259871
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4137,
to 4249,
id gi 067065065075259871
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4250,
to 4388,
id gi 067065065075259871
}
},
{
data prot {
name {
"nsp11"
},
processed mature
},
location int {
from 4389,
to 4401,
id gi 067065065075259871
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25988", version 1}, gi 067065065075259881
},
descr {
title "surface glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 1265,
seq-data iupacaa "MFVFLVLLPLVSSQCVNLITTTQSYTNSFTRGVYYPDKVFRSSVLHLT
QDLFLPFSSNVTWFHAISGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVFIKVC
EFQFCNDPFLDVYHKNNKSWMESESGVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPI
IGRDFPQGFSALEPLVDLPIGINITRFQTLLALNRSYLTPGDSSSGWTAGAADYYVGYLQPRTFLLKYNENGTITDAV
DCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNVTNLCPFHEVFNATTFASVYAWNRTRISNCVADYSV
LYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIKGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKH
SGNYDYWYRSLRKSKLKPFERDISTEIYQAGNKPCKGKGPNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATV
CGPKKSTNLVKNKCVNFNFNGLTGTGVLTKSNKKFLPFQQFGRDIVDTTDAVRDPQTLEILDITPCSFGGVSVITPGT
NTSNQVAVLYQGVNCTEVSVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQTKS
RRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGS
FCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQ
YGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
VLYENQKLIANQFNSAIGKIQDSLFSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDKVEAEVQ
IDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPA
QEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQLELDSF
KEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIA
IVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT"
},
annot {
{
data ftable {
{
data prot {
name {
"surface glycoprotein"
}
},
location int {
from 0,
to 1264,
id gi 067065065075259881
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25989", version 1}, gi 067065065075259891
},
descr {
title "ORF3a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 275,
seq-data iupacaa "MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIV
GVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMR
LWLCWKCRSKNPLLYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLH
SYFTSDYYQLYSTQLSTDIGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF3a protein"
}
},
location int {
from 0,
to 274,
id gi 067065065075259891
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25990", version 1}, gi 067065065075259901
},
descr {
title "envelope protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 75,
seq-data iupacaa "MYSFVSEEIGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVN
VSLVKPSFYVYSRVKNLNSSRVPDLLV"
},
annot {
{
data ftable {
{
data prot {
name {
"envelope protein"
}
},
location int {
from 0,
to 74,
id gi 067065065075259901
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25991", version 1}, gi 067065065075259911
},
descr {
title "membrane glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 222,
seq-data iupacaa "MAHSNGTITVEELKKLLEEWNLVIGFLFLAWICLLQFAYANRNRFLYI
IKLIFLWLLWPVTLTCFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFVRTRSMWSFNPETNILLNVPLHG
TILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNY
KLNTDHSSSSDNIALLVQ"
},
annot {
{
data ftable {
{
data prot {
name {
"membrane glycoprotein"
}
},
location int {
from 0,
to 221,
id gi 067065065075259911
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25992", version 1}, gi 067065065075259921
},
descr {
title "ORF6 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 61,
seq-data iupacaa "MFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSLTENK
YSQLDEEQPMEIL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF6 protein"
}
},
location int {
from 0,
to 60,
id gi 067065065075259921
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25993", version 1}, gi 067065065075259931
},
descr {
title "ORF7a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKIILFLALITLATCELYHYQECVRGTTVLLKEPCSSGTYEGNSPFHP
LADNKFALTCFSTQFAFACPDGVKHVYQLRARSVSPKLFIRQEEVQELYSPIFLIVAAIVFITLCFTLKRKTE"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7a protein"
}
},
location int {
from 0,
to 120,
id gi 067065065075259931
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25994", version 1}, gi 067065065075259941
},
descr {
title "ORF7b [Severe acute respiratory syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 43,
seq-data iupacaa "MIELSLIDFYLCFLAFLLLLVLIMLIIFWFSLELQDHNETCHA"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7b"
}
},
location int {
from 0,
to 42,
id gi 067065065075259941
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25984", version 1}, gi 067065065075259841
},
descr {
title "ORF8 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIR
VGARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDFI"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF8 protein"
}
},
location int {
from 0,
to 120,
id gi 067065065075259841
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25985", version 1}, gi 067065065075259851
},
descr {
title "nucleocapsid phosphoprotein [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 416,
seq-data iupacaa "MSDNGPQNQRNALRITFGGPSDSTGSNQNGGARSKQRRPQGLPNNTAS
WFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDG
IIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTPGSSKRTSP
ARMAGNGGDAALALLLLDRLNKLESKMSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGN
FGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
PPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSRADSTQA"
},
annot {
{
data ftable {
{
data prot {
name {
"nucleocapsid phosphoprotein"
}
},
location int {
from 0,
to 415,
id gi 067065065075259851
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAK25986", version 1}, gi 067065065075259861
},
descr {
title "ORF10 protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 38,
seq-data iupacaa "MGYINVFAFPFTIYSLLLCRMNSRNYIAQVDVVNFNLT"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF10 protein"
}
},
location int {
from 0,
to 37,
id gi 067065065075259861
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
except TRUE,
product whole gi 067065065075259831,
location mix {
int {
from 213,
to 13406,
strand plus,
id gi 0670650650987721
},
int {
from 13406,
to 21493,
strand plus,
id gi 0670650650987721
}
},
xref {
{
id local id 2
}
},
except-text "ribosomal slippage"
},
{
id local id 3,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259871,
location int {
from 213,
to 13421,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 2
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259881,
location int {
from 21501,
to 25298,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 5
}
}
},
{
id local id 6,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259891,
location int {
from 25307,
to 26134,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 7
}
}
},
{
id local id 8,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259901,
location int {
from 26159,
to 26386,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 9
}
}
},
{
id local id 10,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259911,
location int {
from 26437,
to 27105,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 11
}
}
},
{
id local id 12,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259921,
location int {
from 27116,
to 27301,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 13
}
}
},
{
id local id 14,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259931,
location int {
from 27308,
to 27673,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 15
}
}
},
{
id local id 16,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259941,
location int {
from 27670,
to 27801,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 17
}
}
},
{
id local id 18,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259841,
location int {
from 27808,
to 28173,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 19
}
}
},
{
id local id 20,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259851,
location int {
from 28188,
to 29438,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 21
}
}
},
{
id local id 22,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065075259861,
location int {
from 29463,
to 29579,
strand plus,
id gi 0670650650987721
},
xref {
{
id local id 23
}
}
}
}
}
}
}
}
}