- Scientific Name
- Hippocampus abdominalis
- Common Names
- big-belly seahorse;
- Bioproject
- PRJCA004882
- Biosample
- SAMC351879
- Accession No.
- GWHBAVH00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Zhejiang Provincial Key Laboratory for Cancer Molecular Cell Biology, Life Sciences Institute, Zhejiang University
- Contact
- Xin Long, xinl22@zju.edu.cn
- Sequence author(s)
- Libin He, Xin Long, Shuiqing Wu, Zongji Wang, Zhen Huang, Xingtan Zhang, Shiyu Huang, Qi Zhou, Leyun Zheng
- Released Date
- 2021-05-14
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- ALLHiC v0.9.8
- Sequencing & coverage
- PacBio 121.41
- Download
-
DNA
GFF
RNA
Protein
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 444,700,955 |
| GC content | 43.58% |
| Chromosomes sequence No. | 168 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 27,642 | 27,642 |
| Total | 27,642 | 27,642 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 1,949 | 1,949 |
| chr10 | 1,076 | 1,076 |
| chr11 | 1,829 | 1,829 |
| chr12 | 1,212 | 1,212 |
| chr13 | 1,067 | 1,067 |
| chr14 | 1,382 | 1,382 |
| chr15 | 1,256 | 1,256 |
| chr16 | 1,336 | 1,336 |
| chr17 | 1,123 | 1,123 |
| chr18 | 1,124 | 1,124 |
| chr19 | 809 | 809 |
| chr2 | 1,822 | 1,822 |
| chr20 | 1,016 | 1,016 |
| chr21 | 1,098 | 1,098 |
| chr3 | 1,299 | 1,299 |
| chr4 | 1,419 | 1,419 |
| chr5 | 1,403 | 1,403 |
| chr6 | 1,395 | 1,395 |
| chr7 | 1,424 | 1,424 |
| chr8 | 1,308 | 1,308 |
| chr9 | 1,115 | 1,115 |
| chrT185 | 92 | 92 |
| chrT186 | 1 | 1 |
| chrT187 | 3 | 3 |
| chrT188 | 1 | 1 |
| chrT189 | 2 | 2 |
| chrT190 | 1 | 1 |
| chrT191 | 4 | 4 |
| chrT193 | 2 | 2 |
| chrT195 | 6 | 6 |
| chrT196 | 1 | 1 |
| chrT197 | 3 | 3 |
| chrT198 | 4 | 4 |
| chrT199 | 2 | 2 |
| chrT200 | 2 | 2 |
| chrT201 | 1 | 1 |
| chrT202 | 3 | 3 |
| chrT203 | 6 | 6 |
| chrT205 | 2 | 2 |
| chrT206 | 2 | 2 |
| chrT208 | 1 | 1 |
| chrT210 | 1 | 1 |
| chrT213 | 3 | 3 |
| chrT215 | 4 | 4 |
| chrT216 | 2 | 2 |
| chrT217 | 4 | 4 |
| chrT222 | 2 | 2 |
| chrT223 | 1 | 1 |
| chrT228 | 1 | 1 |
| chrT229 | 3 | 3 |
| chrT230 | 2 | 2 |
| chrT233 | 2 | 2 |
| chrT234 | 1 | 1 |
| chrT236 | 1 | 1 |
| chrT237 | 1 | 1 |
| chrT239 | 2 | 2 |
| chrT246 | 1 | 1 |
| chrT249 | 1 | 1 |
| chrT251 | 1 | 1 |
| chrT257 | 1 | 1 |
| chrT259 | 1 | 1 |
| chrT272 | 2 | 2 |
| chrT275 | 1 | 1 |
| chrT294 | 1 | 1 |
| chrT302 | 1 | 1 |
| chrT318 | 1 | 1 |
| Total | 27,642 | 27,642 |