- Scientific Name
- Lycium barbarum
- Common Names
- Duke of Argyll's teatree, matrimony vine, ning xia gou qi, wolfberry; goji berry;
- Bioproject
- PRJCA010759
- Biosample
- SAMC838682
- Accession No.
- GWHBKBE00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Agricultural Synthetic Biology Center, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
- Contact
- Yaoyao Wu, wuyaoyao@caas.cn
- Sequence author(s)
- Yaoyao Wu, Honbo Li, Yong Hu
- Released Date
- 2023-03-21
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Partial Genome
- Assembly method
- hifiasm v0.16.1-r375
juicer v1.6
3d-dna v180922 - Sequencing & coverage
- PacBio HiFi 29.76
- Download
- DNA GFF RNA Protein
- Publication(s)
- Yaoyao Wu, et al. Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell. 2023.
Statistics of Genome Assembly
| Genome size (bp) | 1,862,380,245 |
| GC content | 38.48% |
| Contig sequence No. | 379 |
| Maximum contig sequence length (bp) | 94,587,547 |
| Minimum contig sequence length (bp) | 9,184 |
| Average contig sequence length (bp) | 4,913,932 |
| Contig N50 (bp) | 24,262,857 |
| Contig N90 (bp) | 5,459,292 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 45,301 | 45,301 |