- Scientific Name
- Perilla frutescens var. hirtella
- Common Names
- Perilla setoyensis, Perilla frutescens var. citriodora, Perilla hirtella, Perilla citriodora
- Bioproject
- PRJNA431004
- Biosample
- SAMN08382015
- Accession No.
- GCA_019512045.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Institute of Chinese Materia Medica
- Released Date
- 2023-11-16
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 676,940,316 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 1,789 |
| GC content | 35.5 |
| Scaffold sequence No. | 1,789 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 64,469,250 |
| Scaffold N75 (bp) | 57,865,665 |
| Scaffold N90 (bp) | 53,036,168 |
| Contig sequence No. | 2,888 |
| Contig L50 | 224 |
| Contig N50 (bp) | 854,780 |
| Unique components No. | 1,789 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,099 |
| Ns gap sequence region length (bp) | 109,900 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 23675 | 0 | 0 | 0 | 0 | 0 | 23675 |