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  1. iDog
  2. Haplotype
Haplotype Block
Haplotype supports haplotype analysis with the SNP/INDEL data of the 1,929 samples and 352 breeds. The haplotype frequency, haplotype were calculated using Haplotyp tools integrated from GVM. The linkage disequilibrium calculated and visualized using LDBlockShow tool.
Hold "Ctrl" to select multiple population groups
 
Missing rate <= (range (0, 1), default 0.1)
Heterozy rate <= (range (0, 1), default 0.5)
Missing rate <= (range (0, 1), default 0.1)
Minor allele frequency >= (range (0, 0.5), default 0.05)
   vcf file
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