DogGD
  1. iDog
  2. Help
  3. Expression Database
How to use Dog Expression Data ?

Dog Expression houses gene expression profiles derived entirely from RNA-Seq data analysis on tissues for Canis. DogED features integration and visualization of gene expression profiles based on curated and quality-controlled RNA-Seq data encompassing diverse tissues. The whole landscape gene expression for tissues, breed, cell line is provided, as well as differential gene expression for diseases.

For RNA-seq data, iDog constructs a pipeline to process data.
1. The whole landscape gene expression

The gene expression for all tissues are provided, as well as gene specificity.

2. The differential gene expression

We analyze differential gene expression for 19 diseases, including Anemia, Bcell Lymphoma and so on. The volcap map, tissue relevance map and box plot map are provided.

3. Search data

Users can search the gene by various situations including name, chromosome region and go annotation term. A batch search for input a gene list is also available.

A gene search list web pages as follows.