ORRM2 - Plant Editosome Database

Editing Details

Species

Gene ID

Organelle

Edited Gene

Position

Region

Nuclear Genome

Organelle Genome

Other Region

Other Position

Editing Type

Codon

Amino Acid

Molecular Effect

Experiment Details

Arabidopsis thaliana

AT5G54580

Mitochondrion

ccmB

406

CDS

C-to-U

CUG=>UUG

L=>L

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	24.00%	Low	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	26.00%	Low	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

ccmB

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	47.00%	Medium	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	71.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

ccmC

184

CDS

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	76.00%	High	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	71.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

ccmC

270

CDS

C-to-U

UCC=>UCU

S=>S

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	6.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	8.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

ccmC

463

CDS

C-to-U

CGU=>UGU

R=>C

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	79.00%	High	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	83.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

ccmC

618

CDS

C-to-U

ACC=>ACU

T=>T

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	71.00%	High	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	70.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

ccmFc

1215

CDS

C-to-U

ACC=>ACU

T=>T

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	52.00%	Medium	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	60.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

ccmFc

315

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	0.00%	Unedited	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

ccmFc

406

CDS

C-to-U

CGU=>UGU

R=>C

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	53.00%	Medium	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	74.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

cob

114

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	2.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

mttB

CDS

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	77.00%	High	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	79.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad2

336

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad3

CDS

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	78.00%	High	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	79.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad4

1101

CDS

C-to-U

UAC=>UAU

Y=>Y

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	57.00%	Medium	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	59.00%	Medium	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad4

1131

CDS

C-to-U

CUC/CUC=>CUU/UUU

L=>L/F

Synonymous/Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	2.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	4.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad4

1194

CDS

C-to-U

AUC=>AUU

I=>I

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	5.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	6.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad5

1494

CDS

C-to-U

CUC=>CUU

L=>L

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad5

1933

CDS

C-to-U

CUA=>UUA

L=>L

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad5

Intron

Genomic position

141966

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	7.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	18.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad6

5'UTR

-73

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	60.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad6

5'UTR

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	40.00%	Medium	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad7

213

CDS

C-to-U

GAC=>GAU

D=>D

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	78.00%	High	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	86.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad7

795

CDS

C-to-U

AUC=>AUU

I=>I

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	26.00%	Low	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	39.00%	Low	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad7

963

CDS

C-to-U

UCC=>UCU

S=>S

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	57.00%	Medium	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	85.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad7

Intron

Genomic position

134282

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	2.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad7

Intron

Genomic position

134309

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	76.00%	High	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	86.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

nad9

517

CDS

C-to-U

CAA=>UAA

Q=>Stop codon

Nonsense

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	3.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	2.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

orf114

327

CDS

C-to-U

UUC=>UUU

F=>F

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	45.00%	Medium	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	44.00%	Medium	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

pseudo-rps14

CDS

C-to-U

CCC=>CCU

P=>P

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	4.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	7.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

rpl16

3'UTR

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus-induced gene silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	0.00%	Unedited	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	2.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

rpl5

CDS

C-to-U

CCG/CCG=>CUG/UUG

P=>L/L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	46.00%	Medium	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	70.00%	High	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

rps12

328

CDS

C-to-U

CGA=>UGA

R=>Stop codon

Nonsense

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	0.00%	Unedited	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

rps3

1344

CDS

C-to-U

AGC=>AGU

S=>S

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	14.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	17.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

rps3

270

CDS

C-to-U

CCC=>CCU

P=>P

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	1.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

rps4

711

CDS

C-to-U

UCC=>UCU

S=>S

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	3.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	3.00%	Poor	Decreased	25800738

Arabidopsis thaliana

AT5G54580

Mitochondrion

rps7

5'UTR

-217

C-to-U

NA=>NA

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
NA	ORRM2 sil_1	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	11.00%	Poor	Decreased	25800738
NA	ORRM2 sil_2	Virus Induced Gene Silencing (VIGS)	NA	NA	No macroscopic phenotypic	Leaf	5 weeks	STS-PCRseq	13.00%	Poor	Decreased	25800738

Editing Factor:	ORRM2
Synonym:	ORGANELLE RRM PROTEIN 2
Description:	Transient silencing of ORRM2 and ORRM3 resulted in reduced editing efficiency at ~6% of the mitochondrial C targets; Transient silencing of ORRM2 in the orrm3 mutant further impairs the editing activity at sites controlled by both ORRM2 and ORRM3; Identification of the effect of ORRM2 and ORRM3 on RNA editing reveals a previously undescribed role of RRM-containing proteins as mitochondrial RNA
Protein Family:	Organelle RNA recognition motif-containing (ORRM)
Subclass:	NA
Physical Interaction:	ORRM3
Construct Structure:	NA
Gene ID & Species:	AT5G54580 (Arabidopsis thaliana)
Edited Gene(s):	rpl16 ccmFc rps12 cob nad7 nad5 rps3 nad2 nad4 rps4 nad9 pseudo-rps14 ccmC rps7 ccmB nad6 orf114 rpl5 mttB nad3
Editing Type(s):	C-to-U (70)
Publication(s):	[1] Two RNA recognition motif-containing proteins are plant mitochondrial editing factors, Nucleic Acids Research, 2015. [doi:10.1093/nar/gkv245]

Summary

Editing Details