nad6 - Plant Editosome Database - BIG Data Center

Summary

Gene: nad6
Function: NADH dehydrogenase
Species: 21
Editing Factors:16 (DYW2, EMP21, EMP9, GRS1, MEF37, MEF8, MEF8S, MORF1, MORF8, NUWA, ORRM2, ORRM3, ORRM4, OTP90, PGN, SlORRM4)
Editing Types:
C-to-U (505)
U-to-C (9)
Editing Events: 527 (C-to-U: 505   NA: 13   U-to-C: 9)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Arabidopsis thalianaMitochondrion22
C-to-U: 20
NA: 2
76642-77259
76814
77069
77091
77099
77157
77165
77171
77172
77207
77234
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
CDS
NA
CDS
NA
+
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asclepias syriacaMitochondrion2
NA: 2
498638-499255CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Beta macrocarpaMitochondrion11
C-to-U: 11
382121
382183
382184
382185
382189
382190
382198
382241
382256
382286
382664
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>UCC
CGC=>UGC
UCA=>UUA
CCA=>CUA
CCA=>CUA
CCC=>CUC
CCG=>CUG
UCU=>UUU
UCC=>UUC
CCC=>CCU
CCA=>UCA
P=>S
R=>C
S=>L
P=>L
P=>L
P=>L
P=>L
S=>F
S=>F
P=>P
P=>S
Beta vulgaris subsp. maritimaMitochondrion11
C-to-U: 11
123357
123419
123420
123421
123425
123426
123434
123477
123492
123522
123900
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>CUC
CCA=>CUA
UCU=>UUU
CCC=>CCU
CGC=>UGC
CCA=>UCA
CCG=>CUG
UCC=>UUC
UCA=>UUA
CCA=>CUA
CCC=>UCC
P=>L
P=>L
S=>F
P=>P
R=>C
P=>S
P=>L
S=>F
S=>L
P=>L
P=>S
Beta vulgaris subsp. vulgarisMitochondrion11
C-to-U: 11
193413
193475
193476
193477
193481
193482
193490
193533
193548
193578
193956
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>CCU
CCC=>UCC
CGC=>UGC
UCC=>UUC
CCA=>CUA
CCA=>CUA
CCA=>UCA
CCG=>CUG
UCA=>UUA
UCU=>UUU
CCC=>CUC
P=>P
P=>S
R=>C
S=>F
P=>L
P=>L
P=>S
P=>L
S=>L
S=>F
P=>L
Brassica napusMitochondrion22
C-to-U: 22
164907
164934
164969
164970
164976
164984
165042
165050
165072
165327
165344
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
CCC=>CUC
CCU=>CUU
CCC=>CUC
CCU=>CUU
CAU=>UAU
CAU=>UAU
UCU=>UUU
CCU=>UCU
UCU=>UUU
CCU=>UCU
CGC=>UGC
CGC=>UGC
UCA=>UUA
UCA=>UUA
GCA=>GUA
CCA=>CUA
GCA=>GUA
CCA=>CUA
CCC=>UCC
CCC=>UCC
CCA=>CUA
P=>L
P=>L
P=>L
P=>L
P=>L
H=>Y
H=>Y
S=>F
P=>S
S=>F
P=>S
R=>C
R=>C
S=>L
S=>L
A=>V
P=>L
A=>V
P=>L
P=>S
P=>S
P=>L
Cycas taitungensisMitochondrion4
C-to-U: 4
225216
225818
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
CAA=>UAA
CAA=>UAA
T=>M
T=>M
Q=>TERM
Q=>TERM
Ginkgo bilobaMitochondrion1
NA: 1
258697-259302CDS-NANA=>NANA=>NA
Lotus japonicusMitochondrion24
C-to-U: 24
234658
234832
234930
234952
234960
234975
235018
235026
235032
235033
235068
235095
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>UCC
UCC=>UUC
CGC=>UGC
CCC=>CUC
UCA=>UUA
CCA=>CUA
CCA=>CUA
CCU=>UCU
CAU=>UAU
CUU=>UUU
GCA=>GUA
CCU=>CUU
UCC=>UUC
CGC=>UGC
CCC=>UCC
CCA=>CUA
CCC=>CUC
UCA=>UUA
CCU=>UCU
CAU=>UAU
CCA=>CUA
GCA=>GUA
CCU=>CUU
CUU=>UUU
P=>S
S=>F
R=>C
P=>L
S=>L
P=>L
P=>L
P=>S
H=>Y
L=>F
A=>V
P=>L
S=>F
R=>C
P=>S
P=>L
P=>L
S=>L
P=>S
H=>Y
P=>L
A=>V
P=>L
L=>F
Millettia pinnataMitochondrion24
C-to-U: 24
126907
126934
126969
126970
126976
126984
127027
127042
127050
127072
127170
127344
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
CCU=>CUU
CUU=>UUU
GCA=>GUA
CCU=>UCU
CGC=>UGC
CAU=>UAU
CCC=>CUC
CCA=>CUA
CCC=>UCC
UCA=>UUA
UCC=>UUC
CUU=>UUU
CCA=>CUA
CCU=>CUU
CCU=>UCU
CGC=>UGC
GCA=>GUA
CCA=>CUA
CAU=>UAU
CCC=>CUC
UCC=>UUC
CCC=>UCC
UCA=>UUA
P=>L
P=>L
L=>F
A=>V
P=>S
R=>C
H=>Y
P=>L
P=>L
P=>S
S=>L
S=>F
L=>F
P=>L
P=>L
P=>S
R=>C
A=>V
P=>L
H=>Y
P=>L
S=>F
P=>S
S=>L
Nelumbo nuciferaMitochondrion12
C-to-U: 11
NA: 1
51972-52604
52036
52135
52159
52226
52316
52414
52436
52459
52461
52516
52517
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UUC=>UUU
UCA=>UUA
UCU=>UUU
CCC=>UCC
CUU=>UUU
NA=>NA
CCC=>CUC
UCC=>UUC
CAU=>UAU
CAU=>UAU
UCC=>UUC
CCU=>CUU
F=>F
S=>L
S=>F
P=>S
L=>F
NA=>NA
P=>L
S=>F
H=>Y
H=>Y
S=>F
P=>L
Nothoceros aenigmaticusMitochondrion2
U-to-C: 2
156666CDS
CDS
+U-to-C
U-to-C
UAA=>CAA
UAA=>CAA
TERM=>Q
TERM=>Q
Ophioglossum californicumMitochondrion66
C-to-U: 64
U-to-C: 2
351517
351547
351643
351962
351968
351992
351993
352009
352035
352040
352058
352074
352169
352170
352175
352181
352259
352268
352270
352271
352304
352318
352319
352322
352362
352364
352370
352376
352379
352421
352448
352462
352490
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
3'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
3'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
3'UTR
CDS
3'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
3'UTR
CDS
3'UTR
CDS
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
GCG=>GUG
UCC=>UUC
CCU=>CUU
UCA=>UUA
CCG=>UCG
CCA=>UCA
UUC=>UUU
CCU=>CUU
UCC=>UUC
UCC=>UUC
NA=>NA
UCG=>UUG
CCA=>CUA
UUC=>UUU
UAA=>CAA
GCC=>GUC
AGC=>AGU
CGU=>UGU
NA=>NA
CUC=>CUU
NA=>NA
CCG=>CUG
CAU=>UAU
UCC=>UUC
CCG=>UCG
UCU=>UUU
UUC=>UUU
GCG=>GUG
ACA=>AUA
UCG=>UUG
UCA=>UUA
CCA=>CUA
UCU=>UUU
UUC=>UUU
CCU=>CUU
NA=>NA
UCA=>UUA
NA=>NA
UCA=>UUA
UCG=>UUG
CCG=>CUG
CCU=>CUU
UCC=>UUC
AGC=>AGU
CCA=>UCA
UCU=>UUU
CUC=>CUU
UCC=>UUC
UCG=>UUG
UCC=>UUC
CCA=>CUA
UCU=>UUU
CCA=>CUA
UAA=>CAA
ACA=>AUA
UCC=>UUC
CGU=>UGU
UCA=>UUA
NA=>NA
UCU=>UUU
NA=>NA
CAU=>UAU
NA=>NA
GCC=>GUC
UCA=>UUA
S=>F
A=>V
S=>F
P=>L
S=>L
P=>S
P=>S
F=>F
P=>L
S=>F
S=>F
NA=>NA
S=>L
P=>L
F=>F
TERM=>Q
A=>V
S=>S
R=>C
NA=>NA
L=>L
NA=>NA
P=>L
H=>Y
S=>F
P=>S
S=>F
F=>F
A=>V
T=>I
S=>L
S=>L
P=>L
S=>F
F=>F
P=>L
NA=>NA
S=>L
NA=>NA
S=>L
S=>L
P=>L
P=>L
S=>F
S=>S
P=>S
S=>F
L=>L
S=>F
S=>L
S=>F
P=>L
S=>F
P=>L
TERM=>Q
T=>I
S=>F
R=>C
S=>L
NA=>NA
S=>F
NA=>NA
H=>Y
NA=>NA
A=>V
S=>L
Oryza sativa Japonica GroupMitochondrion18
C-to-U: 18
59525
59531
59568
59570
59575
59661
59663
59691
59946
59968
59976
59978
59979
59991
60048
60049
60111
60112
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAU=>UAU
UCA=>UUA
UCC=>UUC
CCC=>UCC
AUC=>AUU
GAC=>GAU
UCU=>UUU
CCA=>CUA
AUC=>AUU
UCC=>UUC
CCU=>UCU
CCC=>CUC
UCA=>UUA
CCU=>CUU
UCC=>UCU
CUG=>UUG
UCC=>UUC
AUC=>AUU
H=>Y
S=>L
S=>F
P=>S
I=>I
D=>D
S=>F
P=>L
I=>I
S=>F
P=>S
P=>L
S=>L
P=>L
S=>S
L=>L
S=>F
I=>I
Phaeoceros laevisMitochondrion3
NA: 2
U-to-C: 1
179700-179861
180779-181222
180826
CDS
NA
CDS
-
+
NA
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pleurozia purpureaMitochondrion1
C-to-U: 1
27147CDS+C-to-UACG=>AUGT=>M
Psilotum nudumMitochondrion18
C-to-U: 18
241827
241845
241891
241995
242058
242060
242061
242064
242094
242096
242111
242130
242133
242172
242286
242338
242381
242427
CDS
CDS
CDS
CDS
CDS
5'UTR
CDS
CDS
CDS
5'UTR
CDS
CDS
5'UTR
CDS
CDS
CDS
5'UTR
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UUC=>UUU
UCG=>UUG
UUC=>UUU
CUG=>UUG
UCA=>UUA
NA=>NA
CCU=>CUU
CCA=>CUA
UUC=>UUU
NA=>NA
CCG=>CUG
UCC=>UUC
NA=>NA
CCU=>CUU
UCA=>UUA
UCA=>UUA
NA=>NA
UCG=>UUG
F=>F
S=>L
F=>F
L=>L
S=>L
NA=>NA
P=>L
P=>L
F=>F
NA=>NA
P=>L
S=>F
NA=>NA
P=>L
S=>L
S=>L
NA=>NA
S=>L
Welwitschia mirabilisMitochondrion1
NA: 1
235418-236053CDS-NANA=>AUGNA=>M
Zea mays subsp. maysMitochondrion36
C-to-U: 36
565027
565028
565090
565091
565140
565148
565161
565163
565171
565193
565448
565571
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>UUU
CCA=>CUA
UUC=>UUU
CCA=>CUA
UUC=>UUU
UCC=>UUC
UCU=>UUU
UCU=>UUU
CCC=>UUC
CCC=>UUC
CCU=>UUU
UCC=>UUC
CCU=>UUU
UCC=>UUC
CAU=>UAU
UCA=>UUA
CUC=>CUU
UCA=>UUA
CUC=>CUU
UUC=>UUU
CCU=>UUU
CCU=>UUU
CCA=>CUA
UCU=>UUU
CCC=>UUC
UCC=>UUC
CCC=>UUC
UCC=>UUC
CCU=>UUU
UCC=>UUC
CCC=>UUC
CCC=>UUC
CUC=>CUU
CAU=>UAU
CAU=>UAU
UCA=>UUA
P=>F
P=>L
F=>F
P=>L
F=>F
S=>F
S=>F
S=>F
P=>F
P=>F
P=>F
S=>F
P=>F
S=>F
H=>Y
S=>L
L=>L
S=>L
L=>L
F=>F
P=>F
P=>F
P=>L
S=>F
P=>F
S=>F
P=>F
S=>F
P=>F
S=>F
P=>F
P=>F
L=>L
H=>Y
H=>Y
S=>L
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)