nad6 - Plant Editosome Database - CNCB-NGDC

Summary

Gene: nad6
Function: NADH dehydrogenase
Species: 21
Editing Factors:27 (bCCP1, BLX, DEK53, DEK55, DEK56, DYW2, DYW2A, DYW2B, EMP21, GRP23, GRS1, Lon1, MEF37, MEF8, MEF8S, MORF1, MORF8, NUWA, ORRM2, ORRM3, ORRM4, OTP90, PAP2, PCW1, PGN, RIP1b, SOP10)
Editing Types:
C-to-U (505)
U-to-C (9)
Editing Sites: 527 (C-to-U: 505   NA: 13   U-to-C: 9)
External Link: NCBI Gene
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid
Arabidopsis thalianaMitochondrion11
C-to-U: 10
NA: 1
76642-77259
76814
77069
77091
77099
77157
77165
77171
77172
77207
77234
CDS
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
-
+
+
+
+
+
+
+
+
+
+
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asclepias syriacaMitochondrion1
NA: 1
498638-499255CDS-NANA=>NANA=>NA
Beta macrocarpaMitochondrion11
C-to-U: 11
382121
382183
382184
382185
382189
382190
382198
382241
382256
382286
382664
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>CUG
CCC=>UCC
CCC=>CUC
CCC=>CCU
CCA=>UCA
CCA=>CUA
CGC=>UGC
UCC=>UUC
CCA=>CUA
UCA=>UUA
UCU=>UUU
P=>L
P=>S
P=>L
P=>P
P=>S
P=>L
R=>C
S=>F
P=>L
S=>L
S=>F
Beta vulgaris subsp. maritimaMitochondrion11
C-to-U: 11
123357
123419
123420
123421
123425
123426
123434
123477
123492
123522
123900
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>CUG
CCC=>UCC
CCC=>CUC
CCC=>CCU
CCA=>UCA
CCA=>CUA
CGC=>UGC
UCC=>UUC
CCA=>CUA
UCA=>UUA
UCU=>UUU
P=>L
P=>S
P=>L
P=>P
P=>S
P=>L
R=>C
S=>F
P=>L
S=>L
S=>F
Beta vulgaris subsp. vulgarisMitochondrion11
C-to-U: 11
193413
193475
193476
193477
193481
193482
193490
193533
193548
193578
193956
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>CUG
CCC=>UCC
CCC=>CUC
CCC=>CCU
CCA=>UCA
CCA=>CUA
CGC=>UGC
UCC=>UUC
CCA=>CUA
UCA=>UUA
UCU=>UUU
P=>L
P=>S
P=>L
P=>P
P=>S
P=>L
R=>C
S=>F
P=>L
S=>L
S=>F
Brassica napusMitochondrion11
C-to-U: 11
164907
164934
164969
164970
164976
164984
165042
165050
165072
165327
165344
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>CUU
GCA=>GUA
CCC=>UCC
CCC=>CUC
CCA=>CUA
CGC=>UGC
CCA=>CUA
CAU=>UAU
UCA=>UUA
UCU=>UUU
CCU=>UCU
P=>L
A=>V
P=>S
P=>L
P=>L
R=>C
P=>L
H=>Y
S=>L
S=>F
P=>S
Cycas taitungensisMitochondrion2
C-to-U: 2
225216
225818
CDS
CDS
-
-
C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Ginkgo bilobaMitochondrion1
NA: 1
258697-259302CDS-NANA=>NANA=>NA
Lotus japonicusMitochondrion12
C-to-U: 12
234658
234832
234930
234952
234960
234975
235018
235026
235032
235033
235068
235095
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>UCU
CUU=>UUU
UCA=>UUA
CAU=>UAU
CCA=>CUA
UCC=>UUC
CGC=>UGC
CCA=>CUA
CCC=>CUC
CCC=>UCC
GCA=>GUA
CCU=>CUU
P=>S
L=>F
S=>L
H=>Y
P=>L
S=>F
R=>C
P=>L
P=>L
P=>S
A=>V
P=>L
Millettia pinnataMitochondrion12
C-to-U: 12
126907
126934
126969
126970
126976
126984
127027
127042
127050
127072
127170
127344
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>CUU
GCA=>GUA
CCC=>UCC
CCC=>CUC
CCA=>CUA
CGC=>UGC
UCC=>UUC
CCA=>CUA
CAU=>UAU
UCA=>UUA
CUU=>UUU
CCU=>UCU
P=>L
A=>V
P=>S
P=>L
P=>L
R=>C
S=>F
P=>L
H=>Y
S=>L
L=>F
P=>S
Nelumbo nuciferaMitochondrion12
C-to-U: 11
NA: 1
51972-52604
52036
52135
52159
52226
52316
52414
52436
52459
52461
52516
52517
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
+
+
+
+
+
+
+
+
+
+
+
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
UCU=>UUU
CCU=>CUU
UCC=>UUC
CAU=>UAU
CUU=>UUU
UCA=>UUA
CAU=>UAU
UCC=>UUC
UUC=>UUU
CCC=>CUC
CCC=>UCC
NA=>NA
S=>F
P=>L
S=>F
H=>Y
L=>F
S=>L
H=>Y
S=>F
F=>F
P=>L
P=>S
Nothoceros aenigmaticusMitochondrion1
U-to-C: 1
156666CDS+U-to-CUAA=>CAATERM=>Q
Ophioglossum californicumMitochondrion33
C-to-U: 32
U-to-C: 1
351517
351547
351643
351962
351968
351992
351993
352009
352035
352040
352058
352074
352169
352170
352175
352181
352259
352268
352270
352271
352304
352318
352319
352322
352362
352364
352370
352376
352379
352421
352448
352462
352490
3'UTR
3'UTR
3'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
CCA=>CUA
ACA=>AUA
UCA=>UUA
CCA=>UCA
CUC=>CUU
CAU=>UAU
UCA=>UUA
UCG=>UUG
UAA=>CAA
UCG=>UUG
CCG=>UCG
UCU=>UUU
CCG=>CUG
GCC=>GUC
UCA=>UUA
UUC=>UUU
UCC=>UUC
CCA=>CUA
UUC=>UUU
UCC=>UUC
UCC=>UUC
CGU=>UGU
UCU=>UUU
CCU=>CUU
UCC=>UUC
UCU=>UUU
GCG=>GUG
CCU=>CUU
AGC=>AGU
NA=>NA
NA=>NA
NA=>NA
NA=>NA
P=>L
T=>I
S=>L
P=>S
L=>L
H=>Y
S=>L
S=>L
TERM=>Q
S=>L
P=>S
S=>F
P=>L
A=>V
S=>L
F=>F
S=>F
P=>L
F=>F
S=>F
S=>F
R=>C
S=>F
P=>L
S=>F
S=>F
A=>V
P=>L
S=>S
NA=>NA
Oryza sativa Japonica GroupMitochondrion18
C-to-U: 18
59525
59531
59568
59570
59575
59661
59663
59691
59946
59968
59976
59978
59979
59991
60048
60049
60111
60112
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
AUC=>AUU
AUC=>AUU
UCU=>UUU
GAC=>GAU
CUG=>UUG
UCA=>UUA
AUC=>AUU
UCC=>UUC
UCA=>UUA
CAU=>UAU
CCA=>CUA
UCC=>UCU
UCC=>UUC
UCC=>UUC
CCC=>CUC
CCC=>UCC
CCU=>CUU
CCU=>UCU
I=>I
I=>I
S=>F
D=>D
L=>L
S=>L
I=>I
S=>F
S=>L
H=>Y
P=>L
S=>S
S=>F
S=>F
P=>L
P=>S
P=>L
P=>S
Phaeoceros laevisMitochondrion3
NA: 2
U-to-C: 1
179700-179861
180779-181222
180826
CDS
CDS
NA
-
-
+
NA
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pleurozia purpureaMitochondrion1
C-to-U: 1
27147CDS+C-to-UACG=>AUGT=>M
Psilotum nudumMitochondrion18
C-to-U: 18
241827
241845
241891
241995
242058
242060
242061
242064
242094
242096
242111
242130
242133
242172
242286
242338
242381
242427
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
5'UTR
5'UTR
5'UTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
CCG=>CUG
CUG=>UUG
UCA=>UUA
CCA=>CUA
UUC=>UUU
UCC=>UUC
UCA=>UUA
UCA=>UUA
UUC=>UUU
UUC=>UUU
CCU=>CUU
CCU=>CUU
UCG=>UUG
NA=>NA
NA=>NA
NA=>NA
NA=>NA
S=>L
P=>L
L=>L
S=>L
P=>L
F=>F
S=>F
S=>L
S=>L
F=>F
F=>F
P=>L
P=>L
S=>L
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Welwitschia mirabilisMitochondrion1
NA: 1
235418-236053CDS-NANA=>AUGNA=>M
Zea mays subsp. maysMitochondrion12
C-to-U: 12
565027
565028
565090
565091
565140
565148
565161
565163
565171
565193
565448
565571
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>UUU
CCU=>UUU
CCC=>UUC
CCC=>UUC
CUC=>CUU
UCC=>UUC
UUC=>UUU
CCA=>CUA
CAU=>UAU
UCA=>UUA
UCC=>UUC
UCU=>UUU
P=>F
P=>F
P=>F
P=>F
L=>L
S=>F
F=>F
P=>L
H=>Y
S=>L
S=>F
S=>F
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Sep 2026 (version 2.0)