rps7 - Plant Editosome Database - CNCB-NGDC

Summary

Gene: rps7
Function: Ribosomal protein
Species: 62
Editing Factors:15 (bCCP1, DYW2, DYW2A, DYW2B, EMP21, FLO22, GRP23, MEF37, ORRM2, ORRM3, ORRM4, OTP90, PAP2, PCW1, PGN)
Editing Types:
C-to-U (128)
U-to-C (85)
Editing Sites: 231 (C-to-U: 128   U-to-C: 85   NA: 18)
External Link: NCBI Gene
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast2
NA: 2
136982-137425
95426-95869
CDS
CDS
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Alsophila spinulosaChloroplast2
NA: 2
100106-100579
142391-142864
CDS
CDS
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Ampelopteris proliferaChloroplast2
U-to-C: 2
138322
96203
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
TERM=>Q
Anthoceros angustusChloroplast12
C-to-U: 2
U-to-C: 10
110294
110303
110351
110418
110463
110613
158053
158203
158248
158315
158363
158372
NA
NA
NA
NA
NA
NA
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
U-to-C
C-to-U
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
C-to-U
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
UGA=>CGA
UCU=>CCU
UAA=>CAA
UUU=>UCU
UCA=>UUA
GUU=>GCU
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
TERM=>R
S=>P
TERM=>Q
F=>S
S=>L
V=>A
Asclepias syriacaMitochondrion1
NA: 1
986-1432CDS+NANA=>NANA=>NA
Asplenium pekinenseChloroplast2
U-to-C: 2
137795
96110
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Asplenium prolongatumChloroplast4
C-to-U: 2
U-to-C: 2
138636
138794
93968
94127
NA
NA
CDS
CDS
+
+
+
+
U-to-C
C-to-U
C-to-U
U-to-C
NA=>NA
NA=>NA
GCG=>GUG
UAA=>UCA
NA=>NA
NA=>NA
A=>V
TERM=>S
Athyrium anisopterumChloroplast2
U-to-C: 2
137855
95944
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
TERM=>Q
Athyrium opacumChloroplast2
U-to-C: 2
137608
95716
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Athyrium sheareriChloroplast2
U-to-C: 2
137642
95937
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Athyrium sinenseChloroplast2
U-to-C: 2
137855
95915
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
TERM=>Q
Austroblechnum melanocaulonChloroplast1
C-to-U: 1
95283CDS+C-to-UGUG=>UUGV=>L
Beta macrocarpaMitochondrion3
C-to-U: 3
33188
33404
33498
NA
NA
NA
+
+
+
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Beta vulgaris subsp. maritimaMitochondrion3
C-to-U: 3
43567
43783
43877
CDS
CDS
CDS
+
+
+
C-to-U
C-to-U
C-to-U
CCA=>CUA
UCA=>UUA
UUC=>UUU
P=>L
S=>L
F=>F
Beta vulgaris subsp. vulgarisMitochondrion3
C-to-U: 3
231766
231982
232076
CDS
CDS
CDS
+
+
+
C-to-U
C-to-U
C-to-U
CCA=>CUA
UCA=>UUA
UUC=>UUU
P=>L
S=>L
F=>F
Brassica napusMitochondrion1
C-to-U: 1
50040CDS-C-to-UUCA=>UUAS=>L
Christella appendiculataChloroplast2
U-to-C: 2
138091
96087
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Citrullus lanatusMitochondrion2
C-to-U: 2
279570
279786
CDS
CDS
+
+
C-to-U
C-to-U
CCA=>CYA
UCA=>UYA
P=>P/L
S=>S/L
Cucurbita pepoMitochondrion3
C-to-U: 3
785715
785908
785931
CDS
CDS
CDS
+
+
+
C-to-U
C-to-U
C-to-U
CCA=>CYA
UAC=>UAY
UCA=>UUA
P=>P/L
Y=>Y
S=>L
Cycas taitungensisMitochondrion1
C-to-U: 1
392502CDS+C-to-UACG=>AUGT=>M
Cyrtomium devexiscapulaeChloroplast4
U-to-C: 4
138335
138359
95779
95803
NA
NA
CDS
CDS
+
+
+
+
U-to-C
U-to-C
U-to-C
U-to-C
NA=>NA
NA=>NA
UAA=>CAA
UAA=>CAA
NA=>NA
NA=>NA
TERM=>Q
TERM=>Q
Cyrtomium falcatumChloroplast2
U-to-C: 2
138453
95929
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Cystopteris chinensisChloroplast2
U-to-C: 2
137838
96062
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Deparia lanceaChloroplast2
U-to-C: 2
137593
95677
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
TERM=>Q
Deparia pycnosoraChloroplast2
U-to-C: 2
137771
95916
NA
NA
+
+
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast2
U-to-C: 2
137581
95907
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Diplaziopsis cavalerianaChloroplast2
U-to-C: 2
138398
96485
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
TERM=>Q
Diplaziopsis javanicaChloroplast2
U-to-C: 2
138355
96352
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Diplazium bellumChloroplast2
U-to-C: 2
138031
96055
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Diplazium dilatatumChloroplast2
U-to-C: 2
137715
95811
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
TERM=>Q
Diplazium dushanenseChloroplast2
U-to-C: 2
137238
95355
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Diplazium striatumChloroplast2
U-to-C: 2
137345
95420
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Diplazium unilobumChloroplast1
U-to-C: 1
95920CDS+U-to-CUAA=>UACTERM=>Y
Diplopterygium glaucumChloroplast1
NA: 1
1402-1875NA-NANA=>NANA=>NA
Dryopteris decipiensChloroplast2
U-to-C: 2
137606
95846
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Elaeis guineensisChloroplast1
C-to-U: 1
99037CDSNAC-to-UGCC=>GCUA=>A
Homalosorus pycnocarposChloroplast2
U-to-C: 2
138675
96673
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Hymenasplenium unilateraleChloroplast2
U-to-C: 2
138463
96643
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Hypodematium crenatumChloroplast2
U-to-C: 2
136706
95192
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Lepisorus clathratusChloroplast2
U-to-C: 2
139867
98226
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Lotus japonicusMitochondrion2
C-to-U: 2
342953
343169
NA
NA
+
+
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Macrothelypteris torresianaChloroplast2
U-to-C: 2
137743
95803
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Marsilea crenataChloroplast2
NA: 2
140591-141064
98393-98866
CDS
CDS
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Matteuccia struthiopterisChloroplast2
U-to-C: 2
137676
95293
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Myriopteris lindheimeriChloroplast2
U-to-C: 2
142639
96191
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
TERM=>Q
Nelumbo nuciferaMitochondrion4
C-to-U: 3
NA: 1
144031-144477
144146
144201
144362
CDS
CDS
CDS
CDS
-
+
+
+
NA
C-to-U
C-to-U
C-to-U
NA=>NA
UCA=>UUA
CUU=>UUU
CCA=>CUA
NA=>NA
S=>L
L=>F
P=>L
Nothoceros aenigmaticusPlastid1
NA: 1
990-1457NA+NANA=>NANA=>NA
Onoclea sensibilisChloroplast2
U-to-C: 2
135935
94033
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Ophioglossum californicumMitochondrion18
C-to-U: 18
262862
262880
262941
262977
262984
263004
263009
263018
263024
263035
263046
263073
263081
263168
263219
263228
263245
263471
5'UTR
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
3'UTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
CAC=>UAC
CGU=>UGU
ACU=>AUU
CGU=>UGU
CUC=>CUU
ACC=>ACU
CCC=>CCU
ACA=>AUA
CAC=>UAC
CGU=>UGU
GUC=>GUU
AUC=>AUU
UUC=>UUU
UGC=>UGU
CCG=>CUG
NA=>NA
NA=>NA
NA=>NA
H=>Y
R=>C
T=>I
R=>C
L=>L
T=>T
P=>P
T=>I
H=>Y
R=>C
V=>V
I=>I
F=>F
C=>C
P=>L
NA=>NA
Oryza sativa Japonica GroupMitochondrion2
C-to-U: 2
46680
46735
CDS
CDS
-
-
C-to-U
C-to-U
UCA=>UUA
CUU=>UUU
S=>L
L=>F
Osmundastrum cinnamomeumChloroplast1
NA: 1
1391-1858CDS+NANA=>NANA=>NA
Pseudophegopteris auritaChloroplast2
U-to-C: 2
136757
95224
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Psilotum nudumMitochondrion7
C-to-U: 7
45898
45946
45965
46049
46158
46164
46309
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CUG=>UUG
CCU=>UCU
UCC=>UCU
ACC=>ACU
CCG=>CUG
ACA=>AUA
NA=>NA
L=>L
P=>S
S=>S
T=>T
P=>L
T=>I
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast2
U-to-C: 2
139124
97574
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
TERM=>Q
Rhachidosorus consimilisChloroplast2
U-to-C: 2
138936
96986
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Rhazya strictaMitochondrion2
C-to-U: 2
184271
184487
CDS
CDS
-
-
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
S=>L
P=>L
Stegnogramma sagittifoliaChloroplast2
U-to-C: 2
137702
95629
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Takakia lepidozioidesChloroplast1
NA: 1
1281-1748NA+NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast2
U-to-C: 2
137651
95809
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UAC
NA=>NA
TERM=>Y
Woodsia polystichoidesChloroplast2
U-to-C: 2
137342
95490
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>UCA
NA=>NA
TERM=>S
Woodwardia unigemmataChloroplast2
U-to-C: 2
139003
97102
NA
CDS
+
+
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
TERM=>Q
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Sep 2026 (version 2.0)