LncExpDB

Version 2.0

Expression Database of Human Long non-coding RNAs

LncExpDB identifies and characterizes genes associated with wound healing, determines those exhibiting high expression levels, and predicts lncRNA–mRNA interactions based on co-expression network analysis.

Wound healing-associated genes (referred to as featured genes) are defined as those showing differential expression in Intact Skin compared to Wound Day 1, Wound Day 7, or Venous Ulcer samples.
In addition to these featured genes, you can explore other gene groups by clicking on the corresponding bars.
Clicking the "+" icon under the Overview reveals volcano plots and expression trend changes for further exploration.

Gene ID	Gene Symbol	Venous ulcers			Wound day 1			Wound day 7			Overview
Gene ID	Gene Symbol	P.adj	LogFC	Up / Down	P.adj	LogFC	Up / Down	P.adj	LogFC	Up / Down	Overview

(1) Expression Levels:

High Medium Low

(2) Stage :

Venousulcer Wound day 1 Wound day 7

H, M, L, NE are used to represent lncRNA expression Levels. For specifics, please refer to Help > 2.5
Filter results by entering keywords in the Search box at the top right of the Table.

Gene ID	Gene Symbol	Tpm (Mean expression)			Expression Capacities
Gene ID	Gene Symbol	Venous ulcers	Wound day 1	Wound day 7	Venous ulcers	Wound day 1	Wound day 7

Interaction

By clicking the tab of “Interactions”, you can select specific datasets of interest and browse the cis or trans interactions between lncRNAs and mRNAs.
Moreover, user can select a specific group of interaction by custom thresholds or search the related interactions by lncRNA/protein-coding id or symbol.

Cis or Trans Interactions:

Filter Criteria:

Cis Interactions: click here
Trans Interactions: click here
Reset table: click here

Customized Filter:

LncRNA ID	LncRNA Symbol	LncRNA Location	PCG ID	PCG Symbol	PCG Location	R	P value	Distance