LncExpDB

Version 2.0

Expression Database of Human Long non-coding RNAs

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    Reference Gene Model

    LncExpDB gene reference (LncBookv1.9_GENCODEv33_GRCh38.gtf.gz) is downloaded from LncBook

    Gene Expression Analysis

    Context Project Expression Profile Expression Level Featured Gene Co-expression Matrix
    Normal Tissue/Cell Line The Human Protein Atlas expression_profiles_HPA.tar.gz expression_level_HPA.tar.gz tau_HPA.tar.gz coexpression_HPA.tar.gz
    ENCODE Primary Cell Line expression_profiles_SRP013565.tar.gz expression_level_SRP013565.tar.gz tau_SRP013565.tar.gz coexpression_SRP013565.tar.gz
    Organ Development E-MTAB-6814 expression_profiles_E-MTAB-6814.tar.gz expression_level_E-MTAB-6814.tar.gz tau_E-MATB-6814.tar.gz; masigpro_E-MTAB-6814.tar.gz coexpression_E-MATB-6814.tar.gz
    Preimplantation Embryo Preimplantation DataSet1 expression_profiles_SRP011546.tar.gz expression_level_SRP011546.tar.gz tau_SRP011546.tar.gz coexpression_SRP011546.tar.gz
    Preimplantation DataSet2 expression_profiles_SRP061636.tar.gz expression_level_SRP061636.tar.gz tau_SRP061636.tar.gz coexpression_SRP061636.tar.gz
    Cell Differentiation SRP168391 expression_profiles_SRP168391.tar.gz expression_level_SRP168391.tar.gz tau_SRP168391.tar.gz; masigpro_SRP168391.tar.gz coexpression_SRP168391.tar.gz
    Subcellular Localization SRP150867 expression_profiles_SRP150867.tar.gz expression_level_SRP150867.tar.gz deseq2_SRP150867.tar.gz coexpression_SRP150867.tar.gz
    Exosome exoRBase expression_profiles_exoRBase.tar.gz expression_level_exoRBase.tar.gz deseq2_exoRBase.tar.gz coexpression_exoRBase.tar.gz
    ESCC/Normal expression_profiles_SRP119895.tar.gz expression_level_SRP119895.tar.gz deseq2_SRP119895.tar.gz coexpression_SRP119895.tar.gz
    Cancer Cell Line Cancer Cell Line Encyclopedia expression_profiles_CCLE.tar.gz expression_level_CCLE.tar.gz deseq2_CCLE.tar.gz coexpression_CCLE.tar.gz
    Virus Infection HIV, HBV, HCV expression_profiles_SRP182096.tar.gz expression_level_SRP182096.tar.gz deseq2_SRP182096.tar.gz coexpression_SRP182096.tar.gz
    SARS-CoV-2 expression_profiles_SRP253951.tar.gz expression_level_SRP253951.tar.gz deseq2_SRP253951.tar.gz coexpression_SRP253951.tar.gz
    Circadian Rhythm SRP144178 expression_profiles_SRP144178.tar.gz expression_level_SRP144178.tar.gz meta2d_SRP144178.tar.gz coexpression_SRP144178.tar.gz
    Immunotherapy PRJNA624338 expression_profiles_PRJNA624338.tar.gz expression_level_PRJNA624338.tar.gz deseq2_PRJNA624338.tar.gz coexpression_PRJNA624338.tar.gz
    PRJNA356761 expression_profiles_PRJNA356761.tar.gz expression_level_PRJNA356761.tar.gz deseq2_PRJNA356761.tar.gz coexpression_PRJNA356761.tar.gz
    PRJNA557841 expression_profiles_PRJNA557841.tar.gz expression_level_PRJNA557841.tar.gz deseq2_PRJNA557841.tar.gz coexpression_PRJNA557841.tar.gz
    PRJEB25780 expression_profiles_PRJEB25780.tar.gz expression_level_PRJEB25780.tar.gz deseq2_PRJEB25780.tar.gz coexpression_PRJEB25780.tar.gz
    Aging PRJNA413568 expression_profiles_PRJNA413568.tar.gz expression_level_PRJNA413568.tar.gz deseq2_PRJNA413568.tar.gz coexpression_PRJNA413568.tar.gz
    PRJNA690800 expression_profiles_PRJNA690800.tar.gz expression_level_PRJNA690800.tar.gz deseq2_PRJNA690800.tar.gz coexpression_PRJNA690800.tar.gz
    PRJNA223350 expression_profiles_PRJNA223350.tar.gz expression_level_PRJNA223350.tar.gz deseq2_PRJNA223350.tar.gz coexpression_PRJNA223350.tar.gz
    Metabolic Disease PRJNA642130 expression_profiles_PRJNA642130.tar.gz expression_level_PRJNA642130.tar.gz deseq2_PRJNA642130.tar.gz coexpression_PRJNA642130.tar.gz
    PRJNA1021256 expression_profiles_PRJNA1021256.tar.gz expression_level_PRJNA1021256.tar.gz deseq2_PRJNA1021256.tar.gz coexpression_PRJNA1021256.tar.gz
    PRJNA1071142 expression_profiles_PRJNA1071142.tar.gz expression_level_PRJNA1071142.tar.gz deseq2_PRJNA1071142.tar.gz coexpression_PRJNA1071142.tar.gz
    Neurodegenerative Disease PRJNA413568 expression_profiles_PRJNA413568.tar.gz expression_level_PRJNA413568.tar.gz deseq2_PRJNA413568.tar.gz coexpression_PRJNA413568.tar.gz
    PRJNA779421 expression_profiles_PRJNA779421.tar.gz expression_level_PRJNA779421.tar.gz deseq2_PRJNA779421.tar.gz coexpression_PRJNA779421.tar.gz
    PRJNA1166189 expression_profiles_PRJNA1166189.tar.gz expression_level_PRJNA1166189.tar.gz deseq2_PRJNA1166189.tar.gz coexpression_PRJNA779421.tar.gz
    Reproduction PRJNA421274 expression_profiles_PRJNA421274.tar.gz expression_level_PRJNA421274.tar.gz Deseq_PRJNA421274.tar.gz coexpression_PRJNA421274.tar.gz
    Wound Healing PRJNA730912 expression_profiles_PRJNA730912.tar.gz expression_level_PRJNA730912.tar.gz Deseq_PRJNA730912.tar.gz coexpression_PRJNA730912.tar.gz