LncExpDB identifies and characterizes stage-specific genes, consistently expressed genes, and dynamically expressed genes during the differentiation from iPSC to cardiomyocyte, and further predicts lncRNA-mRNA interactions based on co-expression networks.
In addition to the defined featured genes, you can also explore a group of genes of interest with customized filters.
Gene ID | Gene Symbol | Max TPM | Min TPM | Median | Average TPM | Breadth | P Value | K = 5 | K = 6 | K = 7 | K = 8 | Chart | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HSALNG0000002 | N/A | 0.382 | Day 0 | 12.045 | 6.505 | 7.432 | 7.737 | 0.168 | 16 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
| HSALNG0000003 | N/A | 0.238 | Day 0 | 3.439 | 1.691 | 2.729 | 2.673 | 0.151 | 16 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
| HSALNG0000028 | N/A | 0.703 | Day 0 | 1622.415 | 347.466 | 498.107 | 552.596 | 0.538 | 16 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
| HSALNG0000030 | N/A | 0.645 | Day 0 | 14.262 | 2.897 | 4.519 | 5.633 | 0.604 | 16 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
| HSALNG0000033 | N/A | 0.185 | Day 4 | 1.581 | 0.806 | 1.334 | 1.307 | 0.138 | 16 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
| HSALNG0000041 | LINC01128,FAM87B | 0.405 | Day 15 | 6.416 | 0.902 | 4.878 | 3.982 | 0.589 | 16 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
| HSALNG0000051 | N/A | 0.454 | Day 7 | 11.296 | 0.613 | 6.872 | 6.485 | 0.452 | 16 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
| HSALNG0000052 | N/A | 0.488 | Day 5 | 4.650 | 0.318 | 2.551 | 2.524 | 0.465 | 15 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
| HSALNG0000054 | LINC02593 | 0.451 | Day 5 | 9.844 | 0.180 | 6.410 | 5.677 | 0.479 | 14 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | |
| HSALNG0000055 | N/A | 0.452 | Day 5 | 35.391 | 0.169 | 22.551 | 20.397 | 0.495 | 15 | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
LncRNA ID | LncRNA Symbol | LncRNA Location | PCG Symbol | PCG Location | P value | |||
|---|---|---|---|---|---|---|---|---|
| HSALNG0141657 | - | chr1:5045233-5053053(+) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | 0.965 | 0.000 | 3127643 |
| HSALNG0001310 | - | chr1:18288886-18303564(-) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | 0.773 | 0.000 | 16371296 |
| HSALNG0002066 | SNHG3 | chr1:28505943-28518047(+) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | 0.971 | 0.000 | 26588352 |
| HSALNG0002310 | - | chr1:32278001-32279496(+) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | 0.881 | 0.000 | 30360412 |
| HSALNG0003287 | - | chr1:46001045-46001385(+) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | -0.744 | 0.001 | 44083456 |
| HSALNG0003683 | - | chr1:53249666-53250204(-) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | 0.976 | 0.000 | 51332076 |
| HSALNG0004058 | - | chr1:62194822-62237025(+) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | 0.966 | 0.000 | 60277232 |
| HSALNG0004056 | - | chr1:62208136-62208442(-) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | 0.892 | 0.000 | 60290544 |
| HSALNG0004109 | FOXD3-AS1 | chr1:63320764-63324441(-) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | 0.861 | 0.000 | 61403176 |
| HSALNG0010409 | - | chr1:212899315-212908534(-) | ENSG00000178821.13 | TMEM52 | chr1:1917590-1919279(-) | 0.934 | 0.000 | 210981728 |