Deschampsia antarctica - Plant Editosome Database - BIG Data Center

Summary

Species: Deschampsia antarctica
NCBI Taxonomy: 159298
Organelle:Plastid (NC_023533.1)
Edited Genes:15
Editing Events:38
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
atpA134667CDS+mRNAC-to-UUCA=>UUAS=>L
atpB151520CDS-mRNAC-to-UUCG=>UUGS=>L
matK42872
2867
2849
1940
CDS
CDS
CDS
CDS
-
-
-
-
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
ACC=>AUC
CUC=>UUC
CCU=>UCU
CAU=>UAU
U=>I
L=>F
P=>S
H=>Y
ndhA4110858
111365
111455
111878
CDS
CDS
CDS
CDS
-
-
-
-
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
UCC=>UUC
UCA=>UUA
UCA=>UUA
UCG=>UUG
S=>F
S=>L
S=>L
S=>L
ndhB9126791
127109
127228
127253
127346
127379
127472
127478
128123
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
CAU=>UAU
UCA=>UUA
UCC=>UUC
CCA=>CUA
UCA=>UUA
UCA=>UUA
CCA=>CUA
S=>L
P=>L
H=>Y
S=>L
S=>F
P=>L
S=>L
S=>L
P=>L
ndhD1107280CDS-mRNAC-to-UUCA=>UUAS=>L
ndhF2103623
101988
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
UCA=>UUA
GCA=>GUA
S=>L
A=>V
petB172114CDS+mRNAC-to-UCCA=>CUAP=>L
rpl2281979
133335
CDS
CDS
-
+
mRNA
mRNA
C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
rpl20165868CDS-mRNAC-to-UUCA=>UUAS=>L
rpoA173782CDS-mRNAC-to-UCUC=>UUCL=>F
rpoB419652
19595
19580
19502
CDS
CDS
CDS
CDS
+
+
+
+
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>CUG
UCG=>UUG
UCA=>UUA
UCG=>UUG
P=>L
S=>L
S=>L
S=>L
rpoC2525834
26495
26644
27488
28517
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>UCC
CCA=>CUA
CCC=>UCC
CCG=>CUG
UCA=>UUA
P=>S
P=>L
P=>S
P=>L
S=>L
rps8176373CDS-mRNAC-to-UUCA=>UUAS=>L
ycf3141669CDS-mRNAC-to-UUCC=>UUCS=>F

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)