atpB - Plant Editosome Database - BIG Data Center

Summary

Gene: atpB
Function: ATP synthase
Species: 48
Editing Types:
C-to-U (44)
U-to-C (14)
Editing Events: 102 (NA: 44   C-to-U: 44   U-to-C: 14)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
49783-51264CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast1
NA: 1
50758-52239CDS-NANA=>NANA=>NA
Anthoceros angustusChloroplast30
C-to-U: 15
NA: 1
U-to-C: 14
70293-71771
70339
70357
70364
70456
70540
70549
70558
70663
70687
70690
70720
70741
70769
70786
70835
70912
70915
70949
70952
70972
70973
71020
71026
71269
71288
71297
71357
71579
71770
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
CDS
NA
NA
NA
NA
NA
NA
NA
+
-
U-to-C
C-to-U
U-to-C
C-to-U
U-to-C
U-to-C
U-to-C
C-to-U
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
C-to-U
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
NA
U-to-C
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Apopellia endiviifoliaChloroplast1
C-to-U: 1
55770CDS-C-to-UUCG=>UCUS=>S
Asplenium pekinenseChloroplast1
NA: 1
50080-51561CDS-NANA=>NANA=>NA
Asplenium prolongatumChloroplast1
NA: 1
49856-51337CDS-NANA=>NANA=>NA
Athyrium anisopterumChloroplast2
C-to-U: 1
NA: 1
50343-51824
51823
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast2
C-to-U: 1
NA: 1
50202-51683
51682
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast2
C-to-U: 1
NA: 1
50363-51841
51840
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast2
C-to-U: 1
NA: 1
50308-51789
51788
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast2
C-to-U: 1
NA: 1
50337-51818
51817
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cocos nuciferaChloroplast2
C-to-U: 2
52589CDS
CDS
-C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
Cystopteris chinensisChloroplast1
NA: 1
50383-51864CDS-NANA=>NANA=>NA
Dendrobium officinaleChloroplast1
C-to-U: 1
52411CDS-C-to-UUCA=>UUAS=>L
Deparia lanceaChloroplast2
C-to-U: 1
NA: 1
50112-51593
51592
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast1
NA: 1
50451-51932CDS-NANA=>NANA=>NA
Deparia viridifronsChloroplast2
C-to-U: 1
NA: 1
50419-51900
51899
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deschampsia antarcticaPlastid1
C-to-U: 1
51520CDS-C-to-UUCG=>UUGS=>L
Diplaziopsis cavalerianaChloroplast1
NA: 1
50800-52281CDS-NANA=>NANA=>NA
Diplaziopsis javanicaChloroplast1
NA: 1
51022-52503CDS-NANA=>NANA=>NA
Diplazium bellumChloroplast2
C-to-U: 1
NA: 1
50326-51807
51806
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast1
NA: 1
50291-51772CDS-NANA=>NANA=>NA
Diplazium dushanenseChloroplast1
NA: 1
50309-51790CDS-NANA=>NANA=>NA
Diplazium striatumChloroplast1
NA: 1
49937-51418CDS-NANA=>NANA=>NA
Diplazium unilobumChloroplast1
NA: 1
50259-51740CDS-NANA=>NANA=>NA
Diplopterygium glaucumChloroplast1
NA: 1
66773-68254NA-NANA=>NANA=>NA
Dryopteris decipiensChloroplast1
NA: 1
50451-51932CDS-NANA=>NANA=>NA
Elaeis guineensisChloroplast1
C-to-U: 1
54553CDSNAC-to-UUCA=>UUAS=>L
Homalosorus pycnocarposChloroplast1
NA: 1
51066-52547CDS-NANA=>NANA=>NA
Hymenasplenium unilateraleChloroplast2
C-to-U: 1
NA: 1
51133-52614
52613
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast1
NA: 1
50297-51778CDS-NANA=>NANA=>NA
Linum usitatissimumChloroplast1
C-to-U: 1
48849CDS-C-to-UCCC=>UCCP=>S
Lygodium japonicumChloroplast1
NA: 1
52216-53697CDS-NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast1
NA: 1
50332-51813CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast2
C-to-U: 1
NA: 1
49843-51324
51323
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Myriopteris lindheimeriChloroplast2
C-to-U: 1
NA: 1
50349-51830
51829
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
72234-73712NA
NA
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast2
C-to-U: 1
NA: 1
49366-50847
50846
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Phalaenopsis equestrisChloroplast1
C-to-U: 1
53985CDS-C-to-UUCA=>UUAS=>L
Pseudophegopteris auritaChloroplast1
NA: 1
49940-51421CDS-NANA=>NANA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast2
C-to-U: 1
NA: 1
52151-53632
53631
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast2
C-to-U: 1
NA: 1
51130-52611
52610
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea elegansChloroplast2
C-to-U: 1
NA: 1
42912-44384
44383
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea pectinataChloroplast2
C-to-U: 1
NA: 1
40813-42285
42284
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Stegnogramma sagittifoliaChloroplast1
NA: 1
50134-51615CDS-NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast2
C-to-U: 1
NA: 1
50242-51723
51722
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia polystichoidesChloroplast2
C-to-U: 1
NA: 1
49959-51440
51439
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast2
C-to-U: 1
NA: 1
50239-51720
51719
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)