petB - Plant Editosome Database - BIG Data Center

Summary

Gene: petB
Function: Cytochrome b6/f complex
Species: 71
Editing Factors:3 (ORRM1, p70, YL)
Editing Types:
C-to-U (91)
U-to-C (12)
Editing Events: 140 (C-to-U: 91   NA: 37   U-to-C: 12)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Acnistus arborescens x Iochroma cyaneumChloroplast1
NA: 1
78760-79407CDS+NANA=>NANA=>NA
Adiantum capillus-venerisChloroplast2
NA: 2
70468-70473
71179-71820
CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Alsophila spinulosaChloroplast2
NA: 2
74366-74371
75179-75820
CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Ampelopteris proliferaChloroplast1
C-to-U: 1
72916CDS+C-to-UCAA=>UAAQ=>TERM
Anthoceros angustusChloroplast22
C-to-U: 11
U-to-C: 11
94562
94563
94581
94655
94662
94749
94767
94779
94790
94821
94854
94863
94907
94958
95012
95046
95055
95061
95076
95082
95091
95124
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+U-to-C
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
C-to-U
C-to-U
U-to-C
U-to-C
U-to-C
C-to-U
U-to-C
U-to-C
U-to-C
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
C-to-U
UUU=>CUU
UCU=>UUU
UCA=>UUA
CCU=>CUU
CUA=>CCA
UAA=>CAA
UCA=>UUA
CCA=>CUA
UUA=>UCA
CUA=>CCA
CUU=>CCU
CAU=>UAU
UUU=>UCU
UGC=>CGC
UAA=>CAA
CCC=>CUC
UCA=>UUA
AUU=>ACU
UCC=>UUC
UCA=>UUA
UCU=>CCU
UCA=>UUA
F=>L
S=>F
S=>L
P=>L
L=>P
TERM=>Q
S=>L
P=>L
L=>S
L=>P
L=>P
H=>Y
F=>S
C=>R
TERM=>Q
P=>L
S=>L
I=>T
S=>F
S=>L
S=>P
S=>L
Apopellia endiviifoliaChloroplast3
C-to-U: 3
73354
73693
73780
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
UCU=>UUU
UCC=>UUC
UCA=>UUA
S=>F
S=>F
S=>L
Asplenium pekinenseChloroplast1
C-to-U: 1
71521CDS+C-to-UCAA=>UAAQ=>TERM
Asplenium prolongatumChloroplast1
U-to-C: 1
70360CDS+U-to-CAUU=>AUCI=>I
Athyrium anisopterumChloroplast1
C-to-U: 1
72523CDS+C-to-UCGA=>UGAR=>TERM
Athyrium opacumChloroplast1
C-to-U: 1
72375CDS+C-to-UCGA=>UGAR=>TERM
Athyrium sheareriChloroplast1
C-to-U: 1
72520CDS+C-to-UCGA=>UGAR=>TERM
Athyrium sinenseChloroplast1
C-to-U: 1
72468CDS+C-to-UCGA=>UGAR=>TERM
Austroblechnum melanocaulonChloroplast1
C-to-U: 1
72622CDS+C-to-UCGA=>UGAR=>TERM
Christella appendiculataChloroplast1
C-to-U: 1
72746CDS+C-to-UCGA=>UGAR=>TERM
Cocos nuciferaChloroplast4
C-to-U: 4
75833
76026
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
CGG=>UGG
CGG=>UGG
CCA=>CUA
P=>L
R=>W
R=>W
P=>L
Cuscuta reflexaChloroplast2
C-to-U: 2
66256
66449
CDS
CDS
+C-to-U
C-to-U
CCA=>CUA
CGG=>UGG
P=>L
R=>W
Cypripedium macranthosChloroplast2
C-to-U: 2
77392
77585
CDS
CDS
+C-to-U
C-to-U
UCA=>UUA
CGG=>UGG
P=>L
R=>W
Cystopteris chinensisChloroplast1
C-to-U: 1
72645CDS+C-to-UCGA=>UGAR=>TERM
Dendrobium officinaleChloroplast2
C-to-U: 2
76963
77156
CDS
CDS
+C-to-U
C-to-U
UCA=>UUA
CGG=>UGG
P=>L
R=>W
Deparia lanceaChloroplast1
C-to-U: 1
72282CDS+C-to-UCAA=>UAAQ=>TERM
Deparia pycnosoraChloroplast1
C-to-U: 1
72601CDS+C-to-UCGA=>CUAR=>L
Deparia viridifronsChloroplast1
C-to-U: 1
72575CDS+C-to-UCGA=>CUAR=>L
Deschampsia antarcticaPlastid1
C-to-U: 1
72114CDS+C-to-UCCA=>CUAP=>L
Diplaziopsis cavalerianaChloroplast1
C-to-U: 1
73004CDS+C-to-UCGA=>UGAR=>TERM
Diplaziopsis javanicaChloroplast1
C-to-U: 1
73266CDS+C-to-UCAA=>UAAQ=>TERM
Diplazium bellumChloroplast1
C-to-U: 1
72539CDS+C-to-UCGA=>UGAR=>TERM
Diplazium dilatatumChloroplast1
C-to-U: 1
72444CDS+C-to-UCGA=>UGAR=>TERM
Diplazium dushanenseChloroplast1
C-to-U: 1
72475CDS+C-to-UCGA=>UGAR=>TERM
Diplazium striatumChloroplast1
C-to-U: 1
72023CDS+C-to-UCGA=>UGAR=>TERM
Diplazium unilobumChloroplast1
C-to-U: 1
72440CDS+C-to-UCGA=>CUAR=>L
Diplopterygium glaucumChloroplast2
NA: 2
88245-88250
89050-89691
NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Dryopteris decipiensChloroplast2
NA: 2
71055-71060
71842-72498
CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Elaeis guineensisChloroplast1
C-to-U: 1
77124CDSNAC-to-UCGG=>UGGR=>W
Forsythia suspensaChloroplast2
C-to-U: 2
79239
79432
CDS
CDS
+C-to-U
C-to-U
CCA=>CUA
CGG=>UGG
P=>L
R=>W
Helianthus argophyllusChloroplast1
NA: 1
75052-75699CDS+NANA=>NANA=>NA
Hevea brasiliensisChloroplast2
C-to-U: 2
79650
80857
CDS
Intron
+
NA
C-to-U
C-to-U
UCA=>UUA
NA=>NA
S=>L
NA=>NA
Homalosorus pycnocarposChloroplast1
C-to-U: 1
73264CDS+C-to-UCGA=>UGAR=>TERM
Hymenasplenium unilateraleChloroplast2
NA: 2
72006-72011
72803-73444
CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast1
C-to-U: 1
72171CDS+C-to-UCGA=>UGAR=>TERM
Hypseocharis bilobataChloroplast1
C-to-U: 1
39915CDS+C-to-UCGG=>UGGR=>W
Iochroma cardenasianumChloroplast1
NA: 1
78493-79146CDS+NANA=>NANA=>NA
Iochroma lehmanniiChloroplast1
NA: 1
79005-79655CDS+NANA=>NANA=>NA
Iochroma tingoanumChloroplast1
NA: 1
78819-79469CDS+NANA=>NANA=>NA
Isoetes flaccidaChloroplast2
NA: 2
10088-10729
11449-11454
CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lepisorus clathratusChloroplast1
C-to-U: 1
71178CDS+C-to-UCAA=>UAAQ=>TERM
Linum usitatissimumChloroplast1
C-to-U: 1
69505CDS+C-to-UCCA=>CUAP=>L
Lygodium japonicumChloroplast2
NA: 2
73414-73419
74249-74890
CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Macrothelypteris torresianaChloroplast1
C-to-U: 1
72548CDS+C-to-UCAA=>UAAQ=>TERM
Marsilea crenataChloroplast2
NA: 2
76042-76047
76843-77484
CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Matteuccia struthiopterisChloroplast1
C-to-U: 1
71903CDS+C-to-UCGA=>UGAR=>TERM
Millettia pinnataChloroplast2
C-to-U: 2
75153CDS
CDS
+C-to-U
C-to-U
CCA=>CUA
CCA=>CUA
P=>L
P=>L
Myriopteris lindheimeriChloroplast1
C-to-U: 1
72724CDS+C-to-UCAA=>UAAQ=>TERM
Nicotiana sylvestrisChloroplast2
C-to-U: 2
78817CDS
CDS
+C-to-U
C-to-U
CCA=>CUA
CCA=>CUA
P=>L
P=>L
Nicotiana tomentosiformisChloroplast1
C-to-U: 1
78579CDS+C-to-UCCA=>CUAP=>L
Nothoceros aenigmaticusPlastid6
NA: 6
95327-95332
95327-96808
96167-96808
NA
Exon
Exon
Exon
Exon
NA
+NA
NA
NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast1
C-to-U: 1
71562CDS+C-to-UCGA=>UGAR=>TERM
Osmundastrum cinnamomeumChloroplast2
NA: 2
88914-88919
89682-90323
CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Panicum virgatumChloroplast1
C-to-U: 1
73896CDSNAC-to-UNA=>NAP=>L
Pelargonium alternansChloroplast1
C-to-U: 1
89262CDS+C-to-UCGG=>UGGR=>W
Phalaenopsis equestrisChloroplast1
C-to-U: 1
78010CDS+C-to-UCCA=>CUAP=>L
Pseudophegopteris auritaChloroplast1
C-to-U: 1
72200CDS+C-to-UCGA=>UGAR=>TERM
Pteridium aquilinum subsp. aquilinumChloroplast1
C-to-U: 1
72756CDS+C-to-UACG=>AUGT=>M
Rhachidosorus consimilisChloroplast1
C-to-U: 1
73313CDS+C-to-UCGA=>UGAR=>TERM
Saccharum hybrid cultivar SP80-3280Chloroplast1
C-to-U: 1
136733CDS+C-to-UCCA=>CUAP=>L
Solanum lycopersicumChloroplast3
C-to-U: 3
78203CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
CCA=>CUA
CCA=>CUA
CCA=>CUA
P=>L
P=>L
P=>L
Stegnogramma sagittifoliaChloroplast1
C-to-U: 1
72339CDS+C-to-UCAA=>UAAQ=>TERM
Takakia lepidozioidesChloroplast2
NA: 2
93931-93936
94582-95223
NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia macrochlaenaChloroplast1
C-to-U: 1
72453CDS+C-to-UCGA=>UGAR=>TERM
Woodsia polystichoidesChloroplast1
C-to-U: 1
72169CDS+C-to-UCAA=>UAAQ=>TERM
Woodwardia unigemmataChloroplast1
C-to-U: 1
72443CDS+C-to-UCGA=>UGAR=>TERM
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)