Rhazya stricta - Plant Editosome Database - BIG Data Center

Summary

Species: Rhazya stricta
NCBI Taxonomy: 396313
Organelle:Mitochondrion (NC_024293.1); Plastid (NC_024292.1)
Edited Genes:13
Editing Events:292
Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
atp110433539
433678
433792
433915
433990
433539
433678
433792
433915
433990
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>UCC
UCA=>UUA
CCG=>CUG
CCA=>CUA
CCA=>CUA
CCC=>UCC
UCA=>UUA
CCG=>CUG
CCA=>CUA
CCA=>CUA
P=>S
S=>L
P=>L
P=>L
P=>L
P=>S
S=>L
P=>L
P=>L
P=>L
atp62515150-515968
515150-515968
CDS
CDS
-
-
mRNA
mRNA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
atp920140481
140420
140419
140409
140319
140310
140296
140289
140286
140278
140481
140420
140419
140409
140319
140310
140296
140289
140286
140278
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
GUC=>GUU
CUU=>UUU
UCG=>UUG
UCG=>UUG
CCA=>CUA
CUG=>UUG
UCA=>UUA
UCC=>UUC
CGA=>UGA
UCA=>UUA
GUC=>GUU
CUU=>UUU
UCG=>UUG
UCG=>UUG
CCA=>CUA
CUG=>UUG
UCA=>UUA
UCC=>UUC
CGA=>UGA
S=>L
V=>V
L=>F
S=>L
S=>L
P=>L
L=>L
S=>L
S=>F
R=>TERM
S=>L
V=>V
L=>F
S=>L
S=>L
P=>L
L=>L
S=>L
S=>F
R=>TERM
cox136405818
405822
406049
406061
406250
406259
406322
406358
406397
406475
406522
406568
406844
406993
407212
407240
407296
407306
405818
405822
406049
406061
406250
406259
406322
406358
406397
406475
406522
406568
406844
406993
407212
407240
407296
407306
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>CUG
GUC=>GUU
UCU=>UUU
UCU=>UUU
UCA=>UUA
UCU=>UUU
UCC=>UUC
UCA=>UUA
CCA=>CUA
UCU=>UUU
CGG=>UGG
UCC=>UUC
UCC=>UUC
CAC=>UAC
CGU=>UGU
UCA=>UUA
CCA=>UCA
CCG=>CUG
CCG=>CUG
GUC=>GUU
UCU=>UUU
UCU=>UUU
UCA=>UUA
UCU=>UUU
UCC=>UUC
UCA=>UUA
CCA=>CUA
UCU=>UUU
CGG=>UGG
UCC=>UUC
UCC=>UUC
CAC=>UAC
CGU=>UGU
UCA=>UUA
CCA=>UCA
CCG=>CUG
P=>L
V=>V
S=>F
S=>F
S=>L
S=>F
S=>F
S=>L
P=>L
S=>F
R=>W
S=>F
S=>F
H=>Y
R=>C
S=>L
P=>S
P=>L
P=>L
V=>V
S=>F
S=>F
S=>L
S=>F
S=>F
S=>L
P=>L
S=>F
R=>W
S=>F
S=>F
H=>Y
R=>C
S=>L
P=>S
P=>L
cox216280634
280698
280716
280731
280799
280812
280887
280997
280634
280698
280716
280731
280799
280812
280887
280997
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
ACG=>AUG
CCA=>CUA
UCA=>UUA
CCU=>UCU
CCU=>CUU
UCG=>UUG
CGG=>UGG
CGG=>UGG
ACG=>AUG
CCA=>CUA
UCA=>UUA
CCU=>UCU
CCU=>CUU
UCG=>UUG
CGG=>UGG
R=>W
T=>M
P=>L
S=>L
P=>S
P=>L
S=>L
R=>W
R=>W
T=>M
P=>L
S=>L
P=>S
P=>L
S=>L
R=>W
cox316316734
316718
316613
316610
316520
316466
316278
316268
316734
316718
316613
316610
316520
316466
316278
316268
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CUU=>UUU
UCU=>UUU
CCC=>CUC
CCU=>CUU
UCA=>UUA
UCC=>UUC
CGG=>UGG
CCA=>CUA
CUU=>UUU
UCU=>UUU
CCC=>CUC
CCU=>CUU
UCA=>UUA
UCC=>UUC
CGG=>UGG
CCA=>CUA
L=>F
S=>F
P=>L
P=>L
S=>L
S=>F
R=>W
P=>L
L=>F
S=>F
P=>L
P=>L
S=>L
S=>F
R=>W
P=>L
nad468387886
387838
387831
387808
387761
387757
387749
387718
387553
387547
387539
387499
387479
387307
387256
387148
387079
387058
387028
386905
386899
386814
386806
386786
386783
386767
386764
386743
386560
386542
386510
386498
386482
386477
387886
387838
387831
387808
387761
387757
387749
387718
387553
387547
387539
387499
387479
387307
387256
387148
387079
387058
387028
386905
386899
386814
386806
386786
386783
386767
386764
386743
386560
386542
386510
386498
386482
386477
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
CCU=>CUU
UUC=>UUU
CCG=>CUG
CCC=>UCC
CCU=>CUU
CGG=>UGG
UCU=>UUU
ACA=>AUA
UCU=>UUU
CGU=>UGU
CCU=>CUU
CCC=>UCC
UCA=>UUA
UCU=>UUU
CCU=>CUU
UCC=>UUC
UCA=>UUA
UCG=>UUG
CCG=>CUG
UCA=>UUA
UAC=>UAU
UCA=>UUA
CUC=>UUC
CCU=>UCU
UCU=>UUU
UCC=>UUC
UCA=>UUA
CCA=>CUA
UCC=>UUC
CGG=>UGG
CAC=>UAC
CCG=>CUG
CGC=>UGC
UCU=>UUU
CCU=>CUU
UUC=>UUU
CCG=>CUG
CCC=>UCC
CCU=>CUU
CGG=>UGG
UCU=>UUU
ACA=>AUA
UCU=>UUU
CGU=>UGU
CCU=>CUU
CCC=>UCC
UCA=>UUA
UCU=>UUU
CCU=>CUU
UCC=>UUC
UCA=>UUA
UCG=>UUG
CCG=>CUG
UCA=>UUA
UAC=>UAU
UCA=>UUA
CUC=>UUC
CCU=>UCU
UCU=>UUU
UCC=>UUC
UCA=>UUA
CCA=>CUA
UCC=>UUC
CGG=>UGG
CAC=>UAC
CCG=>CUG
CGC=>UGC
S=>F
P=>L
F=>F
P=>L
P=>S
P=>L
R=>W
S=>F
T=>I
S=>F
R=>C
P=>L
P=>S
S=>L
S=>F
P=>L
S=>F
S=>L
S=>L
P=>L
S=>L
Y=>Y
S=>L
L=>F
P=>S
S=>F
S=>F
S=>L
P=>L
S=>F
R=>W
H=>Y
P=>L
R=>C
S=>F
P=>L
F=>F
P=>L
P=>S
P=>L
R=>W
S=>F
T=>I
S=>F
R=>C
P=>L
P=>S
S=>L
S=>F
P=>L
S=>F
S=>L
S=>L
P=>L
S=>L
Y=>Y
S=>L
L=>F
P=>S
S=>F
S=>F
S=>L
P=>L
S=>F
R=>W
H=>Y
P=>L
R=>C
nad546506258
506345
506461
506462
506477
506501
506642
506651
506711
506732
506779
506816
506828
506938
507413
507593
507653
507671
507692
507713
507998
508019
508021
506258
506345
506461
506462
506477
506501
506642
506651
506711
506732
506779
506816
506828
506938
507413
507593
507653
507671
507692
507713
507998
508019
508021
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>CUG
CCG=>CUG
CCU=>UCU
CCU=>CUU
CCA=>CUA
UCU=>UUU
CCU=>CUU
UCG=>UUG
GCC=>GUC
UCU=>UUU
CUU=>UUU
UCG=>UUG
UCA=>UUA
CCA=>UCA
UCA=>UUA
CCC=>CUC
ACC=>AUC
CCG=>CUG
UCU=>UUU
CCC=>CUC
UCA=>UUA
UCU=>UUU
CGU=>UGU
CCG=>CUG
CCG=>CUG
CCU=>UCU
CCU=>CUU
CCA=>CUA
UCU=>UUU
CCU=>CUU
UCG=>UUG
GCC=>GUC
UCU=>UUU
CUU=>UUU
UCG=>UUG
UCA=>UUA
CCA=>UCA
UCA=>UUA
CCC=>CUC
ACC=>AUC
CCG=>CUG
UCU=>UUU
CCC=>CUC
UCA=>UUA
UCU=>UUU
CGU=>UGU
P=>L
P=>L
P=>S
P=>L
P=>L
S=>F
P=>L
S=>L
A=>V
S=>F
L=>F
S=>L
S=>L
P=>S
S=>L
P=>L
T=>I
P=>L
S=>F
P=>L
S=>L
S=>F
R=>C
P=>L
P=>L
P=>S
P=>L
P=>L
S=>F
P=>L
S=>L
A=>V
S=>F
L=>F
S=>L
S=>L
P=>S
S=>L
P=>L
T=>I
P=>L
S=>F
P=>L
S=>L
S=>F
R=>C
nad75251494
51455
51449
51395
51332
51323
51281
51216
51197
51188
51149
50999
50954
50808
50798
50793
50792
50763
50606
50588
50569
50482
50475
50429
50408
50366
51494
51455
51449
51395
51332
51323
51281
51216
51197
51188
51149
50999
50954
50808
50798
50793
50792
50763
50606
50588
50569
50482
50475
50429
50408
50366
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
UCA=>UUA
UCA=>UUA
UCU=>UUU
UCA=>UUA
UCA=>UUA
CGU=>UGU
UCA=>UUA
UCA=>UUA
UCA=>UUA
UCC=>UUC
UCA=>UUA
CAU=>UAU
UCG=>UUG
CCU=>UCU
CCU=>CUU
CGC=>UGC
UCA=>UUA
CCU=>CUU
UCC=>UCU
CCC=>CCU
CGU=>UGU
UCU=>UUU
CCA=>CUA
UCU=>UUU
UCG=>UUG
UCA=>UUA
UCA=>UUA
UCA=>UUA
UCU=>UUU
UCA=>UUA
UCA=>UUA
CGU=>UGU
UCA=>UUA
UCA=>UUA
UCA=>UUA
UCC=>UUC
UCA=>UUA
CAU=>UAU
UCG=>UUG
CCU=>UCU
CCU=>CUU
CGC=>UGC
UCA=>UUA
CCU=>CUU
UCC=>UCU
CCC=>CCU
CGU=>UGU
UCU=>UUU
CCA=>CUA
UCU=>UUU
S=>L
S=>L
S=>L
S=>L
S=>F
S=>L
S=>L
R=>C
S=>L
S=>L
S=>L
S=>F
S=>L
H=>Y
S=>L
P=>S
P=>L
R=>C
S=>L
P=>L
S=>S
P=>P
R=>C
S=>F
P=>L
S=>F
S=>L
S=>L
S=>L
S=>L
S=>F
S=>L
S=>L
R=>C
S=>L
S=>L
S=>L
S=>F
S=>L
H=>Y
S=>L
P=>S
P=>L
R=>C
S=>L
P=>L
S=>S
P=>P
R=>C
S=>F
P=>L
S=>F
rpl516490692
490704
490721
490749
490818
490820
491166
491169
490692
490704
490721
490749
490818
490820
491166
491169
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCG=>CUG
CAC=>UAC
UCG=>UUG
CCG=>CUG
CGC=>UGC
CCA=>CUA
CCG=>CUG
UCA=>UUA
CCG=>CUG
CAC=>UAC
UCG=>UUG
CCG=>CUG
CGC=>UGC
CCA=>CUA
CCG=>CUG
S=>L
P=>L
H=>Y
S=>L
P=>L
R=>C
P=>L
P=>L
S=>L
P=>L
H=>Y
S=>L
P=>L
R=>C
P=>L
P=>L
rps104404532-404704
403434-403683
404532-404704
403434-403683
CDS
CDS
CDS
CDS
+
+
+
+
mRNA
mRNA
mRNA
mRNA
NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
rps74184487
184271
184487
184271
CDS
CDS
CDS
CDS
-
-
-
-
mRNA
mRNA
mRNA
mRNA
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
UCA=>UUA
CCA=>CUA
UCA=>UUA
P=>L
S=>L
P=>L
S=>L

( NA = Data Not Available )

Gene Editing Events Genomic Position Region Strand RNA Type Codons Amino Acids
ndhD2118388
118388
CDS
CDS
-
-
mRNA
mRNA
C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)