cox2 - Plant Editosome Database - BIG Data Center

Summary

Gene: cox2
Function: Cytochrome c oxidase
Species: 22
Editing Factors:19 (COD1, DEK10, DYW2, EMP18, EMP21, MEF21, MEF32, MEF37, MEF8, MORF1, MORF8, NUWA, OGR1, ORRM3, ORRM4, OTP90, PGN, PpPPR_77, PPR27)
Editing Types:
C-to-U (571)
U-to-C (18)
Editing Events: 610 (C-to-U: 571   NA: 21   U-to-C: 18)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Arabidopsis thalianaMitochondrion34
C-to-U: 30
NA: 4
40502-40585
40543
40564
41930-42628
41931
42048
42072
42153
42250
42351
42368
42376
42491
42558
42602
42604
42605
NA
NA
NA
NA
CDS
NA
CDS
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
CDS
NA
NA
NA
NA
NA
NA
NA
NA
NA
CDS
NA
NA
NA
NA
NA
NA
+
-
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asclepias syriacaMitochondrion4
NA: 4
436474-436865
438331-438712
CDS
CDS
CDS
CDS
-NA
NA
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Beta macrocarpaMitochondrion9
C-to-U: 9
36471
36494
36586
36712
38240
38258
38273
38378
38539
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
CGG=>UGG
UCA=>UUA
CGG=>UGG
ACG=>AUG
UCA=>UUA
CUC=>CUU
UCA=>UUA
CCA=>CUA
R=>W
R=>W
S=>L
R=>W
T=>M
S=>L
L=>L
S=>L
P=>L
Beta vulgaris subsp. maritimaMitochondrion9
C-to-U: 9
46850
46873
46965
47091
48619
48637
48652
48757
48918
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
CGG=>UGG
CGG=>UGG
CCA=>CUA
UCA=>UUA
ACG=>AUG
CGG=>UGG
CUC=>CUU
S=>L
S=>L
R=>W
R=>W
P=>L
S=>L
T=>M
R=>W
L=>L
Beta vulgaris subsp. vulgarisMitochondrion9
C-to-U: 9
235048
235071
235163
235289
236816
236834
236849
236954
237115
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
ACG=>AUG
CGG=>UGG
CUC=>CUU
CGG=>UGG
UCA=>UUA
CGG=>UGG
UCA=>UUA
UCA=>UUA
CCA=>CUA
T=>M
R=>W
L=>L
R=>W
S=>L
R=>W
S=>L
S=>L
P=>L
Buxbaumia aphyllaMitochondrion1
C-to-U: 1
69825CDS+C-to-UCAA=>UAAQ=>TERM
Citrullus lanatusMitochondrion10
C-to-U: 10
88778
88870
88985
89086
89150
89183
89251
89264
89288
89405
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
ACG=>AUG
CGG=>UGG
UCA=>UUA
ACG=>AUG
UCA=>UUA
CCU=>UCU
CGG=>UGG
UCU=>UUU
CCG=>CUG
CCU=>CUU
T=>M
R=>W
S=>L
T=>M
S=>L
P=>S
R=>W
S=>F
P=>L
P=>L
Cucurbita pepoMitochondrion12
C-to-U: 12
224167
224200
224292
224407
224508
224572
224605
224673
224686
224710
224827
226859
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
ACG=>AUG
CCG=>CUG
UCA=>UUA
CCU=>UCU
CCU=>CUU
CCU=>UCU
CGG=>UGG
CCU=>CUU
UCA=>UUA
UCU=>UUU
ACG=>AUG
CGG=>UGG
T=>M
P=>L
S=>L
P=>S
P=>L
P=>S
R=>W
P=>L
S=>L
S=>F
T=>M
R=>W
Ginkgo bilobaMitochondrion28
C-to-U: 28
31734
31737
31756
31800
31818
31851
31855
31867
31878
31905
31947
31956
31971
31972
31989
32007
32047
34715
34721
34787
34816
34831
34841
34912
34931
34933
34940
34957
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCA=>UUA
UCA=>UUA
CCA=>CUA
CGG=>UGG
UCA=>UUA
CGG=>UGG
CAU=>UAU
CCA=>CUA
CGG=>UGG
UCU=>UUU
CCC=>UCC
UCA=>UUA
CGG=>UGG
CGU=>UGU
ACG=>AUG
UCU=>UUU
CCA=>CUA
ACG=>AUG
CCA=>CUA
CUC=>UUC
UCA=>UUA
CCA=>UCA
GCA=>GUA
CUG=>UUG
UCG=>UUG
CGG=>UGG
CCG=>CUG
S=>L
S=>L
S=>L
P=>L
R=>W
S=>L
R=>W
H=>Y
P=>L
R=>W
S=>F
P=>S
S=>L
R=>W
R=>C
T=>M
S=>F
P=>L
T=>M
P=>L
L=>F
S=>L
P=>S
A=>V
L=>L
S=>L
R=>W
P=>L
Lotus japonicusMitochondrion26
C-to-U: 26
370771
370792
370815
370881
370956
370969
371037
371070
371134
371235
371260
371350
371352
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
ACG=>AUG
UCG=>UUG
UCA=>UUA
CCG=>CUG
CGG=>UGG
UCA=>UUA
CCU=>UCU
UCA=>UUA
CCG=>CUG
ACG=>AUG
UCA=>UUA
CCU=>UCU
CCU=>UCU
CGG=>UGG
ACG=>AUG
CGG=>UGG
CCU=>UCU
CGG=>UGG
CGG=>UGG
CCU=>CUU
CGG=>UGG
CCU=>CUU
ACG=>AUG
UCG=>UUG
CGG=>UGG
R=>W
T=>M
S=>L
S=>L
P=>L
R=>W
S=>L
P=>S
S=>L
P=>L
T=>M
S=>L
P=>S
P=>S
R=>W
T=>M
R=>W
P=>S
R=>W
R=>W
P=>L
R=>W
P=>L
T=>M
S=>L
R=>W
Millettia pinnataMitochondrion26
C-to-U: 26
96264
96266
96356
96381
96482
96546
96579
96647
96660
96735
96801
96824
96845
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
CCA=>CUA
ACG=>AUG
CGG=>UGG
CCU=>UCU
CGG=>UGG
CCA=>CUA
CGG=>UGG
CGG=>UGG
CCU=>UCU
UCA=>UUA
UCA=>UUA
CGG=>UGG
CGG=>UGG
CCU=>UCU
UCA=>UUA
UCA=>UUA
ACG=>AUG
CGG=>UGG
CCU=>UCU
CCU=>CUU
UCG=>UUG
ACG=>AUG
ACG=>AUG
CCU=>CUU
UCG=>UUG
R=>W
P=>L
T=>M
R=>W
P=>S
R=>W
P=>L
R=>W
R=>W
P=>S
S=>L
S=>L
R=>W
R=>W
P=>S
S=>L
S=>L
T=>M
R=>W
P=>S
P=>L
S=>L
T=>M
T=>M
P=>L
S=>L
Nelumbo nuciferaMitochondrion27
C-to-U: 23
NA: 3
U-to-C: 1
100788-100871
100829
100850
100871
103443-103759
103444
103447
103466
103510
103528
103561
103585
103598
103666
103681
103682
103699
105494-105875
105497
105522
105598
105713
105715
105805
105838
105843
105849
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
-
C-to-U
C-to-U
C-to-U
NA
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
AUC=>AUU
ACG=>AUG
CCA=>CUA
NA=>NA
UCU=>CCU
ACG=>AUG
CGU=>UGU
CGG=>UGG
AUC=>AUU
UCA=>UUA
UCU=>UUU
UCG=>UUG
CCG=>CUG
NA=>NA
CGG=>UGG
CUC=>CUU
UCU=>UUU
UCA=>UUA
CCU=>UCU
CCU=>CUU
NA=>NA
CCU=>CUU
CCU=>UCU
UCA=>UUA
CGG=>UGG
UCA=>UUA
CCA=>UCA
I=>I
U=>M
P=>L
NA=>NA
S=>P
U=>M
R=>C
R=>W
I=>I
S=>L
S=>F
S=>L
P=>L
NA=>NA
R=>W
L=>L
S=>F
S=>L
P=>S
P=>L
NA=>NA
P=>L
P=>S
S=>L
R=>W
S=>L
P=>S
Nothoceros aenigmaticusMitochondrion6
U-to-C: 6
163211
166517
169335
CDS
CDS
CDS
CDS
CDS
CDS
+U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
UAA=>CAA
UAA=>CAA
UAA=>CAA
UAA=>CAA
UAA=>CAA
UAA=>CAA
TERM=>Q
TERM=>Q
TERM=>Q
TERM=>Q
TERM=>Q
TERM=>Q
Ophioglossum californicumMitochondrion34
C-to-U: 34
2445
2467
2615
2650
2716
2717
2718
2752
2836
2882
2995
3008
3149
3170
3176
3432
3446
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
3'UTR
5'UTR
CDS
3'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
3'UTR
CDS
CDS
CDS
CDS
CDS
3'UTR
CDS
CDS
5'UTR
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCC=>UUC
GCU=>GUU
UUC=>UUU
UCG=>UUG
CCU=>UCU
CAU=>UAU
CCU=>CUU
CCA=>CUA
CCC=>UCC
NA=>NA
NA=>NA
CAC=>UAC
NA=>NA
CCC=>UCC
ACG=>AUG
UCC=>UUC
GCU=>GUU
UCU=>UUU
CCA=>CUA
CCU=>UCU
CGG=>UGG
UUC=>UUU
UCG=>UUG
CCC=>UCC
NA=>NA
CAU=>UAU
CCU=>CUU
CCC=>UCC
ACG=>AUG
CAC=>UAC
NA=>NA
CGG=>UGG
UCU=>UUU
NA=>NA
S=>F
A=>V
F=>F
S=>L
P=>S
H=>Y
P=>L
P=>L
P=>S
NA=>NA
NA=>NA
H=>Y
NA=>NA
P=>S
T=>M
S=>F
A=>V
S=>F
P=>L
P=>S
R=>W
F=>F
S=>L
P=>S
NA=>NA
H=>Y
P=>L
P=>S
T=>M
H=>Y
NA=>NA
R=>W
S=>F
NA=>NA
Oryza sativa Japonica GroupMitochondrion19
C-to-U: 19
212426
212442
212445
212489
212556
212579
212581
212671
212797
214136
214153
214154
214169
214237
214250
214274
214307
214325
214391
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
CUC=>CUU
ACG=>AUG
CUC=>CUU
UCA=>UUA
UUC=>UUU
UCA=>UUA
CCC=>UCC
ACG=>AUG
UCA=>UUA
UCA=>UUA
CCA=>CUA
CGG=>UGG
UCA=>UUA
UCU=>UUU
CGG=>UGG
CCA=>UCA
CCU=>CUU
CGG=>UGG
S=>L
L=>L
T=>M
L=>L
S=>L
F=>F
S=>L
P=>S
T=>M
S=>L
S=>L
P=>L
R=>W
S=>L
S=>F
R=>W
P=>S
P=>L
R=>W
Phaeoceros laevisMitochondrion5
U-to-C: 5
23591
23603
26929
31824
35091
CDS
CDS
CDS
CDS
CDS
+U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
UAA=>CAA
UAA=>CAA
UUU=>UUC
UAG=>CAG
UGG=>UGC
TERM=>Q
TERM=>Q
F=>F
TERM=>Q
W=>C
Psilotum nudumMitochondrion17
C-to-U: 17
150270
150346
150398
150447
150453
150485
150527
150528
150536
150551
150711
150793
150846
150848
150872
150969
151006
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCU=>UCU
CCG=>UCG
CGU=>UGU
CAU=>UAU
CGG=>UGG
UGC=>UGU
UCA=>UUA
UCG=>UUG
CCA=>CUA
CGG=>UGG
CCC=>CCU
CGG=>UGG
UCA=>UUA
AUC=>AUU
UCA=>UUA
UCA=>UUA
S=>L
P=>S
P=>S
R=>C
H=>Y
R=>W
C=>C
S=>L
S=>L
P=>L
R=>W
P=>P
R=>W
S=>L
I=>I
S=>L
S=>L
Raphanus sativusMitochondrion2
NA: 2
80675-80757
82107-82806
CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhazya strictaMitochondrion16
C-to-U: 16
280634
280698
280716
280731
280799
280812
280887
280997
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
CCA=>CUA
CGG=>UGG
CGG=>UGG
CCU=>UCU
CCU=>UCU
ACG=>AUG
ACG=>AUG
UCG=>UUG
UCG=>UUG
UCA=>UUA
UCA=>UUA
CGG=>UGG
CGG=>UGG
CCU=>CUU
CCU=>CUU
P=>L
P=>L
R=>W
R=>W
P=>S
P=>S
T=>M
T=>M
S=>L
S=>L
S=>L
S=>L
R=>W
R=>W
P=>L
P=>L
Spirodela polyrhiza 7498Mitochondrion4
C-to-U: 4
221286-221675
222911-223249
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>TERM
NA=>TERM
NA=>TERM
NA=>TERM
Zea mays subsp. maysMitochondrion54
C-to-U: 54
541973
541990
542036
542126
542128
542218
542243
542344
543202
543219
543220
543235
543303
543316
543340
543373
543391
543457
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
CGG=>UGG
UCA=>UUA
CCA=>CUA
UCA=>UUA
CCC=>UCC
CCA=>UUA
CGG=>UGG
ACG=>AUG
UCU=>UUU
CUC=>UUC
UCA=>UUA
UCA=>UUA
CCC=>UCC
CCA=>UUA
CGG=>UGG
UCG=>UUG
CGG=>UGG
CCU=>CUU
CCA=>CUA
CUC=>UUC
UCA=>UUA
UCA=>UUA
CCA=>UUA
CGG=>UGG
ACG=>AUG
UCA=>UUA
CCU=>CUU
CCA=>CUA
CCC=>UCC
UCA=>UUA
CCA=>UUA
UCA=>UUA
UCG=>UUG
ACG=>AUG
UCA=>UUA
CUC=>UUC
ACG=>AUG
UCA=>UUA
UCU=>UUU
CCA=>UUA
UCA=>UUA
UCG=>UUG
CCU=>CUU
CGG=>UGG
CGG=>UGG
UCA=>UUA
UCU=>UUU
CCA=>UUA
ACG=>AUG
UCA=>UUA
UCA=>UUA
CGG=>UGG
ACG=>AUG
R=>W
R=>W
S=>L
P=>L
S=>L
P=>S
P=>L
R=>W
T=>M
S=>F
L=>F
S=>L
S=>L
P=>S
P=>L
R=>W
S=>L
R=>W
P=>L
P=>L
L=>F
S=>L
S=>L
P=>L
R=>W
T=>M
S=>L
P=>L
P=>L
P=>S
S=>L
P=>L
S=>L
S=>L
T=>M
S=>L
L=>F
T=>M
S=>L
S=>F
P=>L
S=>L
S=>L
P=>L
R=>W
R=>W
S=>L
S=>F
P=>L
T=>M
S=>L
S=>L
R=>W
T=>M
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)