atp6 - Plant Editosome Database - CNCB-NGDC

Summary

Gene: atp6
Function: ATP synthase
Species: 28
Editing Factors:19 (bCCP1, DEK53, DYW2, DYW2A, DYW2B, EMP18, EMP21, EMP5, GRP23, MEF37, NUWA, ORRM2, ORRM4, PAP2, PCW1, PPR756, RF1A, RIP1b, SOP10)
Editing Types:
C-to-U (530)
U-to-C (15)
Editing Sites: 582 (C-to-U: 530   NA: 37   U-to-C: 15)
External Link: NCBI Gene
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid
Arabidopsis thalianaMitochondrion1
C-to-U: 1
112224CDS+C-to-UCCA=>UCAP=>S
Batis maritimaMitochondrion1
NA: 1
360979-361923CDS+NANA=>NANA=>TERM
Beta macrocarpaMitochondrion12
C-to-U: 12
4430
4441
4484
4621
4663
4685
4688
4747
4886
5032
5111
5200
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAA=>UAA
ACA=>AUA
CAU=>UAU
UCA=>UUA
UCA=>UUA
CAU=>UAU
CCU=>UCU
UCA=>UUA
CGU=>UGU
UCA=>UUA
CCA=>UCA
ACG=>AUG
Q=>TERM
T=>I
H=>Y
S=>L
S=>L
H=>Y
P=>S
S=>L
R=>C
S=>L
P=>S
T=>M
Beta vulgaris subsp. maritimaMitochondrion12
C-to-U: 12
130886
130897
130940
131077
131119
131141
131144
131203
131342
131488
131567
131656
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAA=>UAA
ACA=>AUA
CAU=>UAU
UCA=>UUA
UCA=>UUA
CAU=>UAU
CCU=>UCU
UCA=>UUA
CGU=>UGU
UCA=>UUA
CCA=>UCA
ACG=>AUG
Q=>TERM
T=>I
H=>Y
S=>L
S=>L
H=>Y
P=>S
S=>L
R=>C
S=>L
P=>S
T=>M
Beta vulgaris subsp. vulgarisMitochondrion12
C-to-U: 12
200938
200949
200992
201129
201171
201193
201196
201255
201394
201540
201619
201708
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAA=>NA
ACA=>AUA
CAU=>UAU
UCA=>UUA
UCA=>UUA
CAU=>UAU
CCU=>UCU
UCA=>UUA
CGU=>UGU
UCA=>UUA
CCA=>UCA
ACG=>AUG
Q=>TERM
T=>I
H=>Y
S=>L
S=>L
H=>Y
P=>S
S=>L
R=>C
S=>L
P=>S
T=>M
Brassica napusMitochondrion1
C-to-U: 1
37309CDS-C-to-UCCA=>UCAP=>S
Carica papayaMitochondrion1
NA: 1
120295-121068CDS-NANA=>NANA=>NA
Citrullus lanatusMitochondrion22
C-to-U: 22
42046
42057
42084
42093
42100
42108
42165
42216
42237
42279
42301
42304
42363
42494
42495
42502
42510
42528
42535
42597
42648
42727
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
+
-
-
-
-
-
-
-
+
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAA=>UAA
ACA=>AUA
UCA=>UUA
UCU=>UUU
CAU=>UAU
UCA=>UUA
CCU=>CUU
UCC=>UUC
UCA=>UUA
UCA=>UUA
CAU=>UAU
CCU=>UCU
UCA=>UUA
CCC=>CUY
CCC=>CUY
CGU=>UGU
UCG=>UUG
UCG=>UUG
CGC=>UGC
CCG=>CUG
UCA=>UUA
CCA=>UCA
Q=>TERM
T=>I
S=>L
S=>F
H=>Y
S=>L
P=>L
S=>F
S=>L
S=>L
H=>Y
P=>S
S=>L
P=>L
P=>L
R=>C
S=>L
S=>L
R=>C
P=>L
S=>L
P=>S
Cucumis sativusMitochondrion1
NA: 1
1312049-1312816CDS+NANA=>NANA=>NA
Cucurbita pepoMitochondrion20
C-to-U: 20
316571
316573
316650
316701
316769
316776
316794
316802
316809
316810
316941
317000
317003
317025
317067
317088
317139
317196
317204
317211
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>UCY
CCC=>UCY
UCA=>UUA
UCG=>UUG
CGC=>UGC
UCG=>UUG
UCG=>UUG
CGU=>UGU
CCC=>CUY
CCC=>CUY
UCA=>UUA
CCU=>UCU
CAU=>UAU
UCA=>UUA
UCA=>UUA
UCC=>UUC
CCU=>CUU
UCA=>UUA
CAU=>UAU
UCU=>UUU
P=>S
P=>S
S=>L
S=>L
R=>C
S=>L
S=>L
R=>C
P=>L
P=>L
S=>L
P=>S
H=>Y
S=>L
S=>L
S=>F
P=>L
S=>L
H=>Y
S=>F
Cycas taitungensisMitochondrion1
C-to-U: 1
35701CDS-C-to-UCGA=>UGAR=>TERM
Erythranthe guttataMitochondrion1
NA: 1
285503-286498CDS+NANA=>NANA=>NA
Ginkgo bilobaMitochondrion1
NA: 1
149303-150070CDS+NANA=>NANA=>NA
Hesperelaea palmeriMitochondrion1
NA: 1
653601-654413CDS-NANA=>NANA=>NA
Hibiscus cannabinusMitochondrion1
C-to-U: 1
470103-471296CDS-C-to-UNA=>NANA=>TERM
Lagerstroemia indicaMitochondrion1
NA: 1
190548-191345CDS-NANA=>NANA=>NA
Liriodendron tulipiferaMitochondrion1
NA: 1
235103-235909CDS+NANA=>NANA=>NA
Lotus japonicusMitochondrion20
C-to-U: 20
120559
120561
120638
120689
120758
120776
120791
120792
120923
120982
120985
121007
121049
121157
121178
121186
121193
121202
121229
121240
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>UCC
CCC=>CCU
UCA=>UUA
CCG=>CUG
UCG=>UUG
UCG=>UUG
CCC=>CUC
CCC=>CCU
UCA=>UUA
CCU=>UCU
CAU=>UAU
UCA=>UUA
UCA=>UUA
CCG=>CUG
UCA=>UUA
CAU=>UAU
UCU=>UUU
UCA=>UUA
ACA=>AUA
CAA=>UAA
P=>S
P=>P
S=>L
P=>L
S=>L
S=>L
P=>L
P=>P
S=>L
P=>S
H=>Y
S=>L
S=>L
P=>L
S=>L
H=>Y
S=>F
S=>L
T=>I
Q=>TERM
Millettia pinnataMitochondrion18
C-to-U: 18
335443
335481
335490
335497
335505
335634
335676
335698
335701
335760
335891
335892
335907
335925
335985
336036
336113
336115
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAA=>UAA
UCA=>UUA
UCU=>UUU
CAU=>UAU
UCA=>UUA
UCA=>UUA
UCA=>UUA
CAU=>UAU
CCU=>UCU
UCA=>UUA
CCC=>CCU
CCC=>CUC
UCG=>UUG
UCG=>UUG
CCG=>CUG
UCA=>UUA
CCC=>CCU
CCC=>UCC
Q=>TERM
S=>L
S=>F
H=>Y
S=>L
S=>L
S=>L
H=>Y
P=>S
S=>L
P=>P
P=>L
S=>L
S=>L
P=>L
S=>L
P=>P
P=>S
Nelumbo nuciferaMitochondrion27
C-to-U: 27
180673
180683
180752
180790
180803
180809
180860
180872
180890
180898
180905
180906
181037
181096
181099
181121
181163
181184
181185
181235
181271
181292
181300
181307
181316
181343
181354
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>UCA
UCU=>UUU
UCA=>UUA
CAU=>UAU
CCG=>CUG
CCG=>CUG
UCC=>UUC
UCG=>UUG
UCG=>UUG
CGU=>UGU
CCC=>CUC
CCC=>CCU
UCA=>UUA
CCU=>UCU
CAU=>UAU
UCA=>UUA
UCA=>UUA
UCC=>UUC
UCC=>UCU
CCU=>CUU
CCG=>CUG
UCA=>UUA
CAU=>UAU
UCU=>UUU
UCA=>UUA
ACA=>AUA
CAA=>UAA
P=>S
S=>F
S=>L
H=>Y
P=>L
P=>L
S=>F
S=>L
S=>L
R=>C
P=>L
P=>P
S=>L
P=>S
H=>Y
S=>L
S=>L
S=>F
S=>S
P=>L
P=>L
S=>L
H=>Y
S=>F
S=>L
U=>I
Q=>TERM
Nothoceros aenigmaticusMitochondrion6
C-to-U: 1
NA: 3
U-to-C: 2
148572-148891
151984-152342
152167
152194
152964-153043
153042
CDS
CDS
NA
NA
CDS
NA
-
-
+
+
-
+
NA
NA
U-to-C
U-to-C
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Ophioglossum californicumMitochondrion54
C-to-U: 53
U-to-C: 1
126163
126216
126217
126222
126237
126285
126321
126324
126348
126365
126395
126419
126432
126438
126445
126486
126493
126510
126518
126525
126540
126590
126591
126600
126624
126641
126645
126658
126660
126696
126705
126716
126719
126726
126760
126783
126795
126804
126809
126843
126871
126879
126882
126888
126894
126909
126924
126930
126937
126938
126944
126948
127090
127109
5'UTR
5'UTR
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
3'UTR
3'UTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
ACG=>AUG
CCG=>CUG
UCG=>UUG
CCA=>CUA
CCA=>CUA
UCA=>UUA
CUG=>UUG
CGG=>UGG
CAU=>UAU
CCU=>CUU
UCG=>UUG
AAC=>AAU
CCG=>CUG
UUC=>UUU
CCA=>CUA
CGU=>UGU
CCG=>CUG
CUU=>CCU
CCC=>UCC
UCC=>UUC
UCC=>UUC
UCU=>UUU
CCU=>UCU
UCU=>UUU
UUC=>UUU
CCA=>CUA
CCA=>CUA
UCG=>UUG
CCU=>UCU
CAU=>UAU
UCU=>UUU
GCC=>GCU
UCG=>UUG
UCA=>UUA
UCU=>UUU
CGG=>UGG
CCA=>CUA
GUC=>GUU
UCA=>UUA
ACU=>AUU
UCG=>UUG
UCG=>UUG
UCA=>UUA
UCC=>UUC
ACU=>AUU
AUC=>AUU
CGU=>UGU
CAC=>UAC
UCG=>UUG
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
T=>M
P=>L
S=>L
P=>L
P=>L
S=>L
L=>L
R=>W
H=>Y
P=>L
S=>L
N=>N
P=>L
F=>F
P=>L
R=>C
P=>L
L=>P
P=>S
S=>F
S=>F
S=>F
P=>S
S=>F
F=>F
P=>L
P=>L
S=>L
P=>S
H=>Y
S=>F
A=>A
S=>L
S=>L
S=>F
R=>W
P=>L
V=>V
S=>L
T=>I
S=>L
S=>L
S=>L
S=>F
T=>I
I=>I
R=>C
H=>Y
S=>L
NA=>NA
NA=>NA
Oryza sativa Japonica GroupMitochondrion16
C-to-U: 16
225273
225311
225320
225327
225464
225506
225528
225722
225729
225736
225755
225762
225866
225908
225935
226263
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAA=>UAA
UCA=>UUA
UCU=>UUU
CAU=>UAU
UCA=>UUA
UCA=>UUA
CAU=>UAU
CCC=>CUC
CGU=>UGU
UCG=>UCU
UCG=>UUG
CGC=>UGC
UCA=>UUA
CCA=>CUA
UCU=>UUU
CAC=>UAC
Q=>TERM
S=>L
S=>F
H=>Y
S=>L
S=>L
H=>Y
P=>L
R=>C
S=>S
S=>L
R=>C
S=>L
P=>L
S=>F
H=>Y
Phaeoceros laevisMitochondrion4
C-to-U: 1
U-to-C: 3
184620
185472
185499
189075
CDS
CDS
CDS
CDS
+
+
+
+
C-to-U
U-to-C
U-to-C
U-to-C
ACG=>AUG
UAA=>CAA
UAA=>CAA
UAA=>CAA
T=>M
TERM=>Q
TERM=>Q
TERM=>Q
Psilotum nudumMitochondrion27
C-to-U: 27
195696
195698
195800
195871
195895
195908
195914
195986
196074
196076
196080
196121
196133
196134
196172
196195
196217
196233
196259
196285
196364
196370
196385
196393
196409
196413
196424
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
ACG=>AUG
CCA=>CUA
CGG=>UGG
CAU=>UAU
CCU=>CUU
UCG=>UUG
UCA=>UUA
CUC=>CUU
UCU=>UUU
AUC=>AUU
UCU=>UUU
UCC=>UUC
UUC=>UUU
CCA=>CUA
CAU=>UAU
UCA=>UUA
UUC=>UUU
UCA=>UUA
CGG=>UGG
UCA=>UUA
UCG=>UUG
UCA=>UUA
CAU=>UAU
UCA=>UUA
AUC=>AUU
UCG=>UUG
NA=>NA
T=>M
P=>L
R=>W
H=>Y
P=>L
S=>L
S=>L
L=>L
S=>F
I=>I
S=>F
S=>F
F=>F
P=>L
H=>Y
S=>L
F=>F
S=>L
R=>W
S=>L
S=>L
S=>L
H=>Y
S=>L
I=>I
S=>L
Rhazya strictaMitochondrion1
NA: 1
515150-515968CDS-NANA=>NANA=>NA
Ziziphus jujubaMitochondrion1
NA: 1
121956-122729CDS-NANA=>NANA=>NA
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Sep 2026 (version 2.0)