PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_A01G004022 View in Genome Browser
Position	chrA01:36447129-36453079 (+) 5950bp
Gene Type	gene
Gene Description (Protein Product)	Decapping nuclease DXO homolog
Organism	Populus alba x Populus glandulosa
Also AS	Potri.001G149900AT4G17620Potri.001G149900.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G01G020842 RNase P subunit p30 Pop_A09G059548 RNase P subunit p30 Pop_A01G054757 RNase P subunit p30
Regulatory gene	Pop_A01G003809 Belongs to the GRAS family Pop_A01G004588 Scarecrow-like protein Pop_A01G005864 Belongs to the GRAS family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC