Basic Information
Gene ID
Pop_A01G004072
Position
chrA01:36928404-36932400 (-)
3996bp
Gene Type
gene
Gene Description (Protein Product)
Ribose-phosphate pyrophosphokinase
Organism
Also AS Potri.001G145700AT1G32380AT2G35390Potri.001G145700.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_A11G021730 Glutathione S-transferase
Pop_G11G077713 Glutathione S-transferase
Pop_G09G030339 Glutamine phosphoribosylpyrophosphate amidotransferase
Regulatory gene
Pop_A01G004123 zinc finger CCCH domain-containing protein
Pop_A01G004498 Tesmin/TSO1-like CXC domain
Pop_A01G005927 zinc finger CCCH domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00230 Purine metabolism -
map00030 Pentose phosphate pathway The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].