Basic Information
Gene ID
Pop_A01G004124
Position
chrA01:37438974-37442480 (-)
3506bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the 3-beta-HSD family
Organism
Also AS Potri.001G140700AT2G23910Potri.001G140700.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_A05G002097 4-coumarate--CoA ligase-like
Pop_G05G057405 4-coumarate--CoA ligase-like
Pop_G09G077322 caffeoyl-CoA O-methyltransferase
Regulatory gene
Pop_A01G003796 isoform X1
Pop_A01G003952 transcription factor
Pop_A01G003954 Homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.