Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_A01G054816
View in Genome Browser
Position
chrA01:24780725-24782714 (-)
1989bp
Gene Type
gene
Gene Description (Protein Product)
tobamovirus multiplication protein
Organism
Populus alba x Populus glandulosa
Also AS Potri.001G146100AT1G32400Potri.001G146100.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_A11G026254 Tobamovirus multiplication protein 1
Pop_G04G023235 Tobamovirus multiplication protein 1
Pop_A04G018313 Tobamovirus multiplication protein 1
Regulatory gene
Pop_A01G002215 NAC domain-containing protein
Pop_A01G003796 isoform X1
Pop_A01G003802 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000325 plant-type vacuole CC
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005794 Golgi apparatus CC
GO:0005911 cell-cell junction CC
GO:0008150 biological_process BP
GO:0009506 plasmodesma CC
GO:0009705 plant-type vacuole membrane CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016032 viral process BP
GO:0019058 viral life cycle BP
GO:0019079 viral genome replication BP
GO:0030054 cell junction CC
GO:0031090 organelle membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043621 protein self-association MF
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046786 viral replication complex formation and maintenance BP
GO:0051704 obsolete multi-organism process BP
GO:0055044 symplast CC
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC